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Sticky topic Sticky: FAQ
by admin » Mon, 2010-08-30 01:38
1
19,148 by Sergey
Fri, 2015-09-04 16:14
Normal topic Non-standard amino acids
by mark.wilson » Mon, 2010-08-02 12:13
0
1,394 by mark.wilson
Mon, 2014-04-21 06:47
Normal topic trRosetta modelling with a ligand
by ShiranBZ » Tue, 2020-08-25 01:44
0
577 by ShiranBZ
Tue, 2020-08-25 01:44
Normal topic New files for loop modeling
by Victor » Fri, 2012-02-03 14:36
0
1,198 by Victor
Mon, 2014-04-21 06:47
Normal topic PyRosetta v1.1
by jadolfbr » Tue, 2010-02-09 08:02
0
1,139 by jadolfbr
Mon, 2014-04-21 06:47
Normal topic building a 77 amino acid long fragment
by tevang » Fri, 2010-02-19 06:37
0
1,255 by tevang
Mon, 2014-04-21 06:47
Normal topic analysis utilities for trajectories
by cbala » Mon, 2010-06-14 02:58
0
1,319 by cbala
Mon, 2014-04-21 06:47
Normal topic rosetta.core.pack.pack_rotamers_setup(pose, score_fxn, task_design, rotsets) not working
by tschiex » Sun, 2017-11-05 08:29
0
862 by tschiex
Sun, 2017-11-05 08:29
Normal topic Best way to store a pose by Pyrosetta for Pyrosetta
by matteoferla » Wed, 2021-04-07 06:50
0
242 by matteoferla
Wed, 2021-04-07 06:50
Normal topic residue selection / secondary structure constraints
by sharang » Thu, 2010-08-05 10:16
0
1,392 by sharang
Mon, 2014-04-21 06:47
Normal topic WindowsError: [Error 32]
by jetu20 » Sun, 2020-10-11 21:02
0
348 by jetu20
Sun, 2020-10-11 21:02
Normal topic Affinity optimization with GreedyOptMutationMover
by wentlewi » Thu, 2020-05-07 08:29
0
394 by wentlewi
Thu, 2020-05-07 12:33
Normal topic Gunn fragment insertion
by jadolfbr » Sun, 2010-02-28 09:39
0
1,268 by jadolfbr
Mon, 2014-04-21 06:47
Normal topic Windows version of PyRosetta 2.0 is ready for download!
by Sergey » Fri, 2011-02-11 15:58
0
1,370 by Sergey
Mon, 2014-04-21 06:47
Normal topic Suggestion: setting Sphinx documentation to not skip __init__
by matteoferla » Mon, 2020-08-24 09:02
0
537 by matteoferla
Mon, 2020-08-24 09:02
Normal topic How to tell where and what fragment or rotamer was inserted?
by charlie.strauss » Wed, 2010-01-27 10:36
0
1,233 by charlie.strauss
Mon, 2014-04-21 06:47
Normal topic Displaying side-chain rotamers in PyMol
by ajasja » Wed, 2014-09-24 08:57
0
2,129 by ajasja
Wed, 2014-09-24 08:57
Normal topic Python3.8 release for Mac download is a dead link
by noahC_noahDo » Fri, 2020-06-26 18:20
0
383 by noahC_noahDo
Fri, 2020-06-26 18:20
Normal topic ImportError PyUnicodeUCS2
by nunesjulioc » Wed, 2010-02-17 07:29
0
2,399 by nunesjulioc
Mon, 2014-04-21 06:47
Normal topic How can I insert my variable length fragmrnts library into pyrosetta?
by michelleqyh » Tue, 2020-08-04 07:26
0
323 by michelleqyh
Tue, 2020-08-04 07:26
Normal topic Frequently Asked Questions
by sid » Fri, 2009-10-02 09:00
0
1,754 by sid
Mon, 2014-04-21 06:47
Normal topic cleanATOM() for non-ideal amino acids
by ac.research » Thu, 2018-03-29 07:50
0
857 by ac.research
Thu, 2018-03-29 07:50
Normal topic Architecture question
by jwillis » Thu, 2010-02-25 09:43
0
1,370 by jwillis
Mon, 2014-04-21 06:47
Normal topic Question Regarding Usage of Specific Rosetta Tools in PyRosetta
by jurkm » Thu, 2010-07-22 23:54
0
1,246 by jurkm
Mon, 2014-04-21 06:47
Normal topic Compile C++ Rosetta to Pyrosetta
by michelleqyh » Fri, 2020-08-21 08:44
0
292 by michelleqyh
Fri, 2020-08-21 08:44
Normal topic Can we have email alert for the reply?
by lanselibai » Wed, 2014-08-13 13:24
0
1,359 by lanselibai
Wed, 2014-08-13 13:24
Normal topic Symmetry breaks due to small structure gaps
by dbiedermann » Mon, 2021-09-20 17:39
0
54 by dbiedermann
Mon, 2021-09-20 17:40
Normal topic Scoring with CCP4 electron density maps constraints
by xfliu » Thu, 2012-05-03 03:30
0
1,684 by xfliu
Mon, 2014-04-21 06:47
Normal topic Problems with building bindings.
by AndrewBworth » Thu, 2010-02-04 17:26
0
1,420 by AndrewBworth
Mon, 2014-04-21 06:47
Normal topic how to use constrains in PyRosetta?
by ast » Mon, 2011-09-05 07:22
0
1,708 by ast
Mon, 2014-04-21 06:47
Normal topic DockingSlideIntoContact does not work
by batch2k » Wed, 2010-02-17 05:57
0
1,217 by batch2k
Mon, 2014-04-21 06:47
Normal topic dump_pdb problems
by srballard » Fri, 2010-05-28 14:04
0
1,650 by srballard
Mon, 2014-04-21 06:47
Normal topic Announcements
by sid » Fri, 2009-10-02 08:54
0
1,215 by sid
Mon, 2014-04-21 06:47
Normal topic small molecule docking
by sharang » Mon, 2010-08-02 14:57
0
1,418 by sharang
Mon, 2014-04-21 06:47
Normal topic Updating Coords
by jadolfbr » Sat, 2010-01-30 10:33
0
1,380 by jadolfbr
Mon, 2014-04-21 06:47
Normal topic PyRosetta 1.1 for Windows?
by sylvia » Tue, 2010-02-09 16:06
0
1,124 by sylvia
Mon, 2014-04-21 06:47
Normal topic Pyrosetta imported after rdkit
by matteoferla » Sun, 2020-03-01 02:38
0
536 by matteoferla
Sun, 2020-03-01 02:38
Normal topic London
by MarkW » Sun, 2015-02-08 14:14
0
1,577 by MarkW
Sun, 2015-02-08 14:14
Normal topic Structure not changing after pose.set_phi
by publicclass » Thu, 2020-11-05 09:34
0
301 by publicclass
Thu, 2020-11-05 09:34
Normal topic PyMOLMover object has no attribute 'link'
by nleroy » Mon, 2019-07-22 07:51
0
566 by nleroy
Mon, 2019-07-22 07:51
Normal topic How to fold-and-dock in PyRosetta?
by sarah_b » Thu, 2020-05-14 02:37
0
465 by sarah_b
Thu, 2020-05-14 02:37
Normal topic Pyrosetta protocol to move protein-peptide docked complex closer to active site.
by eduardoftoliveira » Fri, 2018-06-29 02:50
0
1,273 by eduardoftoliveira
Fri, 2018-06-29 03:46
Normal topic Distance constraints for amino acids pairs
by blubbi » Tue, 2010-05-18 05:39
0
1,373 by blubbi
Mon, 2014-04-21 06:47
Normal topic Segfault when loading scorefxn() and load_from_pdb()
by mm » Wed, 2020-07-22 03:00
0
329 by mm
Wed, 2020-07-22 03:02
Normal topic PyRosetta version 2.011 for Mac/Linux is ready to download!
by Sergey » Mon, 2011-11-21 08:51
0
1,320 by Sergey
Mon, 2014-04-21 06:47
Normal topic Hydrogen Bonding Distances and Atom identification
by kmolloy717 » Fri, 2021-06-25 08:15
1
150 by matteoferla
Wed, 2021-06-30 09:02
Normal topic Jump question
by rfschleif » Wed, 2011-06-15 14:00
1
2,107 by smlewis
Mon, 2014-04-21 06:47
Normal topic ClassicRelax with ligand
by S » Mon, 2010-09-27 07:55
1
1,574 by smlewis
Mon, 2014-04-21 06:47
Normal topic Dose it support Fixed Backbone Ddg Prediction?
by ppprotein » Fri, 2010-01-29 00:54
1
1,601 by sid
Mon, 2014-04-21 06:47
Normal topic Parsing XML tags using pyrosetta
by rbehan » Mon, 2015-10-19 06:37
1
1,868 by rmoretti
Mon, 2015-10-19 08:25
Normal topic Scoring after switching back to fullatom
by thorx020 » Thu, 2013-10-03 08:06
1
1,649 by jadolfbr
Mon, 2014-04-21 06:48
Normal topic Motif Graft Mover error
by ac.research » Tue, 2019-03-26 13:25
1
1,036 by rmoretti
Thu, 2019-05-09 15:56
Normal topic Pyrosetta2
by bharat_46010 » Mon, 2011-02-28 05:00
1
1,907 by Sergey
Mon, 2014-04-21 06:47
Normal topic Script running, but returns no results
by chinhsutran » Fri, 2013-11-22 06:25
1
1,668 by rmoretti
Mon, 2014-04-21 06:48
Normal topic Falling at the first hurdle
by pardave » Tue, 2010-01-05 00:53
1
1,751 by jadolfbr
Mon, 2014-04-21 06:47
Normal topic Question about the error when using pyrosetta.distributed.io
by cuiyoutian » Sun, 2019-05-19 00:54
1
1,073 by rmoretti
Mon, 2019-06-24 12:54
Normal topic task_pack.restrict_to_repacking() not working
by lanselibai » Mon, 2014-08-11 08:06
1
1,555 by rmoretti
Tue, 2014-08-12 08:35
Normal topic generate_nonstandard_residue_set() takes exactly 2 arguments (1given)
by yanghaobjordan » Mon, 2018-01-29 18:59
1
1,489 by rmoretti
Tue, 2018-01-30 06:29
Normal topic Explicit water
This topic has been moved to "Rosetta 3 - General " (View topic)
Normal topic Viewing and modifying hydrogen bond detection criteria
by promero » Tue, 2014-09-16 15:26
1
2,139 by rmoretti
Wed, 2014-09-17 07:29
Normal topic RemodelMover() and the blueprint file
by ac.research » Wed, 2018-06-27 03:55
1
1,255 by rmoretti
Sat, 2018-06-30 02:38
Normal topic protein structure prediction
by ravi1709 » Thu, 2011-07-28 00:05
1
1,919 by smlewis
Mon, 2014-04-21 06:47
Normal topic How to set options under PyRosetta
by lennylv » Thu, 2011-01-06 18:11
1
2,950 by Sergey
Mon, 2014-04-21 06:47
Normal topic Error with importing the pdb file
by nasim.soltani58 » Fri, 2020-12-18 22:46
1
435 by matteoferla
Tue, 2021-01-05 04:05
Normal topic segfault in loop
by reve_etrange » Sat, 2010-02-13 21:49
1
1,539 by reve_etrange
Mon, 2014-04-21 06:47
Normal topic MakeRotLib documentation for Pyrosetta
by ltassoulas » Sat, 2013-07-06 16:15
1
1,834 by jadolfbr
Mon, 2014-04-21 06:48
Normal topic Ligand dihedral moves
by lah435 » Tue, 2015-03-03 11:56
1
1,722 by rmoretti
Fri, 2015-04-24 13:17
Normal topic PyRosetta license
by AOK » Fri, 2011-11-11 01:20
1
1,799 by JeffreyGray
Mon, 2014-04-21 06:47
Normal topic how do I compile the python bindings for rosetta3 for python2.5 linux x86_64
by tru » Wed, 2009-11-25 11:38
1
1,643 by luki
Mon, 2014-04-21 06:47
Normal topic Memory Issues PyRosetta?
by ast » Sat, 2012-03-24 03:21
1
1,672 by smlewis
Mon, 2014-04-21 06:47
Normal topic Adding energies of residues doesnt add up to energy of the entire protein
by astrofunk » Tue, 2010-09-14 11:24
1
2,283 by smlewis
Mon, 2014-04-21 06:47
Normal topic Folding Video
by ac.research » Sat, 2018-05-12 09:19
1
1,141 by rmoretti
Sat, 2018-06-30 02:38
Normal topic GDT_TS how can I get it with pyrosetta?
by oppopomoz » Thu, 2014-01-09 02:51
1
2,064 by rmoretti
Mon, 2014-04-21 06:48
Normal topic [Solved]NameError
by nunesjulioc » Fri, 2010-02-05 08:26
1
1,622 by AlexI
Mon, 2014-04-21 06:47
Normal topic hydrogen bond parameters used in detecting h-bonds by pyrosetta
by bharat_46010 » Sun, 2013-07-21 23:44
1
1,941 by jadolfbr
Mon, 2014-04-21 06:48
Normal topic pose_from_pdb gives RuntimeError: unidentifiable C++ exception?
by cossio » Thu, 2014-11-27 14:43
1
2,240 by cossio
Fri, 2014-11-28 05:05
Normal topic number of residues in a specific chain
by felipet » Mon, 2015-03-09 09:30
1
1,968 by jadolfbr
Mon, 2015-03-09 12:54
Normal topic PyRosetta on a HPC
by ac.research » Thu, 2019-03-14 02:00
1
908 by rmoretti
Wed, 2019-07-10 10:17
Normal topic Calculate TM-score
by nasim.soltani58 » Fri, 2021-03-26 16:50
1
344 by rmoretti
Mon, 2021-03-29 06:53
Normal topic undefined symbol: PyUnicodeUCS4_FromEncodedObject (from libboost_python-mt-py26.so.1.38.0)
by embl-structures » Thu, 2010-08-05 05:02
1
19,404 by embl-structures
Mon, 2014-04-21 06:47
Normal topic PyMOL did not work from a remote machine with PyRosetta
by Jeremy1990 » Sat, 2015-08-08 21:25
1
1,838 by rmoretti
Wed, 2015-08-12 10:29
Normal topic Cannot get PyMOL_Observer to work on MacOS
by cno » Thu, 2012-02-16 09:15
1
1,730 by Sergey
Mon, 2014-04-21 06:47
Normal topic "Server Could Not Be Reached" although I have an Internet connection
by aushawxian » Sun, 2018-01-28 20:21
1
1,238 by walcob
Mon, 2018-01-29 11:22
Normal topic Missing residue coordinates in PDB files
by lanselibai » Thu, 2014-09-04 07:34
1
4,355 by rmoretti
Thu, 2014-09-04 11:36
Normal topic Fundamental methods: pose.residue().total_atom(), pose.atom(#) ?
by msellers » Mon, 2010-11-01 10:53
1
1,741 by smlewis
Mon, 2014-04-21 06:47
Normal topic RuntimeError: unidentifiable C++ exception in both linux and window.
by wajidarshad » Tue, 2015-10-27 08:16
1
2,436 by rmoretti
Tue, 2015-10-27 08:46
Normal topic Neutralize the C and N termini
by rosettauser » Mon, 2011-07-25 07:24
1
1,927 by smlewis
Mon, 2014-04-21 06:47
Normal topic Amino acid modifications: retinal linked to lysine
by tsikosek » Tue, 2014-01-21 12:52
1
2,419 by rmoretti
Mon, 2014-04-21 06:48
Normal topic No pdb output file when running ab initio modeling
by bunyaviridae » Thu, 2013-06-20 01:33
1
2,074 by rmoretti
Mon, 2014-04-21 06:48
Normal topic pose_from_rcsb error
by criss.hartzell » Wed, 2020-04-22 15:12
1
716 by matteoferla
Thu, 2020-04-30 12:04
Normal topic Error when using "generate_resfile_from_pose" function
by zhangying1990 » Fri, 2019-01-25 00:45
1
1,258 by zhangying1990
Fri, 2019-02-01 00:44
Normal topic Replace the rotamer of a particular residue in a pose
by AyushGoyal » Wed, 2014-04-02 23:45
1
1,643 by rmoretti
Thu, 2014-04-03 07:27
Normal topic Rosetta Docking server
by hourosetta » Fri, 2011-02-11 08:36
1
2,728 by smlewis
Mon, 2014-04-21 06:47
Normal topic Error in loop modeling protocol its showing error "NameError: name 'ccd_closure' is not defined"
by jai_INMAS » Sun, 2013-10-20 05:22
1
1,919 by Labonte
Mon, 2014-09-08 09:13
Normal topic D070_Refinement.py
by thorx020 » Fri, 2012-09-14 06:40
1
1,839 by smlewis
Mon, 2014-04-21 06:47
Normal topic Relax with constraints in PyRosetta
by ac.research » Tue, 2017-11-21 10:17
1
2,112 by rmoretti
Sat, 2017-12-09 01:50
Normal topic RNA docking
by eschulz » Tue, 2012-02-28 03:04
1
3,529 by smlewis
Mon, 2014-04-21 06:47
Normal topic Specifying disulfide bonds
by msellers » Thu, 2010-12-02 10:38
1
3,115 by msellers
Mon, 2014-04-21 06:47
Normal topic Rigid body perturbation while docking
by wajidarshad » Fri, 2015-12-11 02:14
1
1,873 by rmoretti
Wed, 2015-12-16 11:25
Normal topic how to add water into protein interface using solvated rotamers?
by chinhsutran » Sun, 2013-07-21 20:25
1
1,860 by smlewis
Mon, 2014-04-21 06:48

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