Hi, everyone. Recently I'm using Rosetta to perform the modeling of a loop region. But when I check the score.sc file, I got several values that are extremely high. I don't know how rosetta perform the scoring of these models. Is it due the clash of atoms ? Does it mean that this conformation is bad and should not be taken into consideration ? Besides, I want to convert the rosetta energy into physical energy unit (kcal/mol) ? How can I perform this ? Can anyone give me some tips ?
Thank you very much