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Sticky topic Sticky: FAQ
by admin » Mon, 2010-08-30 01:38
1
19,141 by Sergey
Fri, 2015-09-04 16:14
Normal topic Symmetry breaks due to small structure gaps
by dbiedermann » Mon, 2021-09-20 17:39
0
22 by dbiedermann
Mon, 2021-09-20 17:40
Normal topic Molfile to params creating invalid params output
by edan » Sun, 2021-08-29 01:54
1
105 by tsztain
Sun, 2021-08-29 11:15
Normal topic restricted fast relax changes whole structure?
by patcD » Wed, 2021-08-25 02:05
2
118 by patcD
Wed, 2021-09-01 03:30
Normal topic Hydrogen Bonding Distances and Atom identification
by kmolloy717 » Fri, 2021-06-25 08:15
1
140 by matteoferla
Wed, 2021-06-30 09:02
Normal topic Less silly way to get number of iterations of Relax
by matteoferla » Tue, 2021-07-20 07:00
2
198 by matteoferla
Tue, 2021-07-20 13:44
Normal topic Pyrosetta score protein structures with missing atoms in sidechain
by xuezhi » Fri, 2021-04-09 13:33
1
202 by matteoferla
Sat, 2021-04-10 07:18
Normal topic Explicit water
This topic has been moved to "Rosetta 3 - General " (View topic)
Normal topic pyrosetta die slow
by Eden » Sun, 2021-06-13 00:05
2
224 by Eden
Mon, 2021-06-14 23:10
Normal topic Best way to store a pose by Pyrosetta for Pyrosetta
by matteoferla » Wed, 2021-04-07 06:50
0
235 by matteoferla
Wed, 2021-04-07 06:50
Normal topic How to relax glycans after glycosylating sites on a pose?
by sdtruong » Mon, 2021-03-22 09:44
2
263 by sdtruong
Mon, 2021-03-22 17:05
Normal topic Compile C++ Rosetta to Pyrosetta
by michelleqyh » Fri, 2020-08-21 08:44
0
289 by michelleqyh
Fri, 2020-08-21 08:44
Normal topic Protocol for adding/mutating non-canonical AA
by joeri » Thu, 2021-03-25 08:14
2
294 by vmulligan
Mon, 2021-03-29 10:39
Normal topic Structure not changing after pose.set_phi
by publicclass » Thu, 2020-11-05 09:34
0
299 by publicclass
Thu, 2020-11-05 09:34
Normal topic Protocol for adding/mutating non-canonical AA
by joeri » Thu, 2021-03-25 08:14
1
306 by matteoferla
Tue, 2021-03-30 08:20
Normal topic How can I insert my variable length fragmrnts library into pyrosetta?
by michelleqyh » Tue, 2020-08-04 07:26
0
320 by michelleqyh
Tue, 2020-08-04 07:26
Normal topic Segfault when loading scorefxn() and load_from_pdb()
by mm » Wed, 2020-07-22 03:00
0
325 by mm
Wed, 2020-07-22 03:02
Normal topic Calculate TM-score
by nasim.soltani58 » Fri, 2021-03-26 16:50
1
334 by rmoretti
Mon, 2021-03-29 06:53
Normal topic How do I insert or delete residues into specific locations?
by Mgerber@mail.yu.edu » Sun, 2020-12-20 15:03
1
338 by matteoferla
Tue, 2021-01-05 03:53
Normal topic WindowsError: [Error 32]
by jetu20 » Sun, 2020-10-11 21:02
0
342 by jetu20
Sun, 2020-10-11 21:02
Normal topic FastRelax results in bad structure
by Eden » Mon, 2021-04-26 08:39
2
360 by Eden
Wed, 2021-06-23 01:13
Normal topic Extending Pyrosetta toturials for docking by adding constraints
by nasim.soltani58 » Thu, 2020-11-26 13:16
1
366 by matteoferla
Wed, 2020-12-02 13:49
Normal topic Python3.8 release for Mac download is a dead link
by noahC_noahDo » Fri, 2020-06-26 18:20
0
378 by noahC_noahDo
Fri, 2020-06-26 18:20
Normal topic Affinity optimization with GreedyOptMutationMover
by wentlewi » Thu, 2020-05-07 08:29
0
392 by wentlewi
Thu, 2020-05-07 12:33
Normal topic Atom-wise energy terms from nearest N-neighbors
by jasiozaucha » Thu, 2021-03-25 14:49
3
392 by matteoferla
Fri, 2021-05-28 02:41
Normal topic Individual Residue Energy
by Peik » Fri, 2021-02-19 10:13
2
399 by Peik
Fri, 2021-02-19 10:30
Normal topic How to create an ObjexxFCL FArray?
by matteoferla » Tue, 2020-08-18 03:22
3
424 by matteoferla
Thu, 2021-07-08 06:02
Normal topic Error with importing the pdb file
by nasim.soltani58 » Fri, 2020-12-18 22:46
1
425 by matteoferla
Tue, 2021-01-05 04:05
Normal topic How to fold-and-dock in PyRosetta?
by sarah_b » Thu, 2020-05-14 02:37
0
463 by sarah_b
Thu, 2020-05-14 02:37
Normal topic "Server Could Not Be Reached" although I have an Internet connection
by epi89 » Mon, 2020-09-28 21:32
1
487 by smlewis
Tue, 2020-09-29 12:00
Normal topic Different types of MinMover
by nasim.soltani58 » Sun, 2020-12-20 11:44
2
493 by nasim.soltani58
Tue, 2020-12-22 13:37
Normal topic Assesing the docking
by nasim.soltani58 » Sat, 2020-12-05 21:19
2
497 by nasim.soltani58
Tue, 2020-12-08 22:44
Normal topic Suggestion: setting Sphinx documentation to not skip __init__
by matteoferla » Mon, 2020-08-24 09:02
0
530 by matteoferla
Mon, 2020-08-24 09:02
Normal topic Pyrosetta imported after rdkit
by matteoferla » Sun, 2020-03-01 02:38
0
533 by matteoferla
Sun, 2020-03-01 02:38
Normal topic PyMOLMover object has no attribute 'link'
by nleroy » Mon, 2019-07-22 07:51
0
561 by nleroy
Mon, 2019-07-22 07:51
Normal topic how do i unding properly?
by patcD » Fri, 2020-11-20 00:38
2
564 by matteoferla
Fri, 2020-11-20 07:47
Normal topic Interface Analyzer with Glycans
by drewaight » Tue, 2020-06-09 20:06
1
571 by matteoferla
Wed, 2020-07-01 05:30
Normal topic trRosetta modelling with a ligand
by ShiranBZ » Tue, 2020-08-25 01:44
0
574 by ShiranBZ
Tue, 2020-08-25 01:44
Normal topic Alternatives to DockMCMProtocol
by swirt » Thu, 2021-01-28 17:37
4
591 by swirt
Thu, 2021-02-25 21:54
Normal topic cartesian delta delta G
by patcD » Wed, 2021-02-10 01:46
3
702 by j0kaso
Wed, 2021-03-03 17:37
Normal topic pose_from_rcsb error
by criss.hartzell » Wed, 2020-04-22 15:12
1
706 by matteoferla
Thu, 2020-04-30 12:04
Normal topic Score bonus to hbond
by yijietseng » Fri, 2019-07-05 12:28
1
736 by rmoretti
Tue, 2019-07-09 09:42
Normal topic Custom Constraints
by jinli711 » Wed, 2020-07-15 15:22
2
768 by matteoferla
Fri, 2020-10-09 05:20
Normal topic Generating Atom Pair Constraints
by Peik » Wed, 2020-08-05 15:39
3
817 by Peik
Thu, 2020-08-06 11:50
Normal topic Gradient Descent
by nasim.soltani58 » Thu, 2020-10-01 16:02
3
823 by vmulligan
Tue, 2020-10-06 15:13
Normal topic cleanATOM() for non-ideal amino acids
by ac.research » Thu, 2018-03-29 07:50
0
852 by ac.research
Thu, 2018-03-29 07:50
Normal topic rosetta.core.pack.pack_rotamers_setup(pose, score_fxn, task_design, rotsets) not working
by tschiex » Sun, 2017-11-05 08:29
0
860 by tschiex
Sun, 2017-11-05 08:29
Normal topic Adding Custom AtomTypes to Pyrosetta
by garrettameek » Wed, 2019-03-13 15:06
1
867 by rmoretti
Thu, 2019-05-09 15:06
Normal topic ΔG Calculation with PyRosetta
by Sandra » Tue, 2019-05-21 00:26
1
887 by rmoretti
Mon, 2019-06-24 12:47
Normal topic Need help figuring out the meaning and cause of an error
by AleksanderK » Fri, 2019-05-03 11:02
1
891 by rmoretti
Thu, 2019-05-09 14:32
Normal topic PyRosetta on a HPC
by ac.research » Thu, 2019-03-14 02:00
1
902 by rmoretti
Wed, 2019-07-10 10:17
Normal topic Calling SnugDock from PyRosetta
by shruthi.murali » Wed, 2020-07-29 15:10
3
930 by matteoferla
Fri, 2020-08-07 03:29
Normal topic Adding a residue type to a residue type set
by matteoferla » Wed, 2020-07-08 08:14
2
934 by matteoferla
Fri, 2020-07-10 02:20
Normal topic Using pyrosetta to generate quaternary structure of protein
by nasim.soltani58 » Thu, 2020-11-19 17:35
5
953 by nasim.soltani58
Tue, 2020-12-08 22:45
Normal topic ERROR: unrecognized element Rp when using pose_from_pdb
by johnnytam100 » Thu, 2020-07-09 02:53
3
973 by rmoretti
Thu, 2020-07-09 08:35
Normal topic set_torsion_angle error
by yijietseng » Tue, 2019-07-09 12:43
2
974 by yijietseng
Wed, 2019-07-10 09:28
Normal topic Changing the membrane Thickness (THKN)
by jlapin » Mon, 2018-11-12 06:32
1
991 by ralford
Wed, 2018-12-19 03:20
Normal topic Motif Graft Mover error
by ac.research » Tue, 2019-03-26 13:25
1
1,029 by rmoretti
Thu, 2019-05-09 15:56
Normal topic Passing a dictionary from pyrosetta to rosetta
by SenyorDrew » Mon, 2017-11-13 11:33
1
1,049 by rmoretti
Fri, 2017-12-01 10:10
Normal topic Modeling small molecules
by iGemBoulder » Wed, 2019-09-18 11:53
2
1,054 by rmoretti
Wed, 2019-09-18 14:24
Normal topic Determine residues where Backrub Mover is applied
by jferrie » Fri, 2017-10-27 08:19
1
1,059 by rmoretti
Fri, 2017-12-01 10:25
Normal topic Question about the error when using pyrosetta.distributed.io
by cuiyoutian » Sun, 2019-05-19 00:54
1
1,060 by rmoretti
Mon, 2019-06-24 12:54
Normal topic individual residue score
by yijietseng » Wed, 2019-05-29 09:59
2
1,069 by yijietseng
Fri, 2019-05-31 12:21
Normal topic Movers for unspecified DoF
by tfobe » Wed, 2019-04-17 17:30
2
1,088 by tfobe
Mon, 2019-05-20 16:05
Normal topic Minimization not changing jump edge vector length
by bio_james » Tue, 2017-12-12 09:32
1
1,096 by rmoretti
Sat, 2017-12-16 10:47
Normal topic How do you combine two .pdb protein structure files of the same protein?
by nasim.soltani58 » Sun, 2020-11-22 23:14
4
1,123 by nasim.soltani58
Tue, 2020-12-08 22:44
Normal topic PyRosetta 1.1 for Windows?
by sylvia » Tue, 2010-02-09 16:06
0
1,124 by sylvia
Mon, 2014-04-21 06:47
Normal topic Folding Video
by ac.research » Sat, 2018-05-12 09:19
1
1,136 by rmoretti
Sat, 2018-06-30 02:38
Normal topic PyRosetta v1.1
by jadolfbr » Tue, 2010-02-09 08:02
0
1,138 by jadolfbr
Mon, 2014-04-21 06:47
Normal topic GenericMonteCarloMover accept/reject moves
by ac.research » Fri, 2018-06-08 06:04
1
1,167 by rmoretti
Sat, 2018-06-30 02:37
Normal topic Output several poses in a silent file
by SenyorDrew » Tue, 2018-03-20 07:12
1
1,170 by Martin Floor
Tue, 2018-12-11 05:43
Normal topic Classic Relax
by iGemBoulder » Fri, 2019-06-28 09:24
2
1,188 by sheehajh
Wed, 2019-07-17 12:43
Normal topic Best Way to Append/Insert Residue
by jaulicino » Tue, 2020-07-21 10:24
3
1,193 by matteoferla
Sat, 2020-07-25 03:52
Normal topic New files for loop modeling
by Victor » Fri, 2012-02-03 14:36
0
1,197 by Victor
Mon, 2014-04-21 06:47
Normal topic Announcements
by sid » Fri, 2009-10-02 08:54
0
1,214 by sid
Mon, 2014-04-21 06:47
Normal topic DockingSlideIntoContact does not work
by batch2k » Wed, 2010-02-17 05:57
0
1,216 by batch2k
Mon, 2014-04-21 06:47
Normal topic Designating Fold Tree Edges as Flexible or Rigid
by nleroy » Tue, 2019-07-23 11:34
3
1,217 by smlewis
Tue, 2019-07-23 13:27
Normal topic Docking between peptide and lipid-biayer
by sprinkle166 » Thu, 2017-10-26 08:35
1
1,217 by rmoretti
Fri, 2017-12-01 10:34
Normal topic How to tell where and what fragment or rotamer was inserted?
by charlie.strauss » Wed, 2010-01-27 10:36
0
1,230 by charlie.strauss
Mon, 2014-04-21 06:47
Normal topic "Server Could Not Be Reached" although I have an Internet connection
by aushawxian » Sun, 2018-01-28 20:21
1
1,231 by walcob
Mon, 2018-01-29 11:22
Normal topic Residue is not compatible with cutpoints
by iGemBoulder » Thu, 2019-06-06 08:57
2
1,237 by iGemBoulder
Tue, 2019-06-11 08:36
Normal topic Question Regarding Usage of Specific Rosetta Tools in PyRosetta
by jurkm » Thu, 2010-07-22 23:54
0
1,244 by jurkm
Mon, 2014-04-21 06:47
Normal topic RemodelMover() and the blueprint file
by ac.research » Wed, 2018-06-27 03:55
1
1,247 by rmoretti
Sat, 2018-06-30 02:38
Normal topic Error when using "generate_resfile_from_pose" function
by zhangying1990 » Fri, 2019-01-25 00:45
1
1,250 by zhangying1990
Fri, 2019-02-01 00:44
Normal topic building a 77 amino acid long fragment
by tevang » Fri, 2010-02-19 06:37
0
1,252 by tevang
Mon, 2014-04-21 06:47
Normal topic Gunn fragment insertion
by jadolfbr » Sun, 2010-02-28 09:39
0
1,264 by jadolfbr
Mon, 2014-04-21 06:47
Normal topic Pyrosetta protocol to move protein-peptide docked complex closer to active site.
by eduardoftoliveira » Fri, 2018-06-29 02:50
0
1,264 by eduardoftoliveira
Fri, 2018-06-29 03:46
Normal topic why two packing setting return different energy?
by zhangying1990 » Wed, 2019-01-30 00:18
2
1,267 by zhangying1990
Fri, 2019-02-01 00:30
Normal topic analysis utilities for trajectories
by cbala » Mon, 2010-06-14 02:58
0
1,318 by cbala
Mon, 2014-04-21 06:47
Normal topic PyRosetta version 2.011 for Mac/Linux is ready to download!
by Sergey » Mon, 2011-11-21 08:51
0
1,320 by Sergey
Mon, 2014-04-21 06:47
Normal topic Can we have email alert for the reply?
by lanselibai » Wed, 2014-08-13 13:24
0
1,357 by lanselibai
Wed, 2014-08-13 13:24
Normal topic Windows version of PyRosetta 2.0 is ready for download!
by Sergey » Fri, 2011-02-11 15:58
0
1,369 by Sergey
Mon, 2014-04-21 06:47
Normal topic Architecture question
by jwillis » Thu, 2010-02-25 09:43
0
1,369 by jwillis
Mon, 2014-04-21 06:47
Normal topic Distance constraints for amino acids pairs
by blubbi » Tue, 2010-05-18 05:39
0
1,373 by blubbi
Mon, 2014-04-21 06:47
Normal topic Updating Coords
by jadolfbr » Sat, 2010-01-30 10:33
0
1,380 by jadolfbr
Mon, 2014-04-21 06:47
Normal topic Sample dihedral database
by tiagogomes89 » Mon, 2018-03-12 04:28
2
1,380 by tiagogomes89
Mon, 2018-03-12 10:01
Normal topic Libmini crashes after protocol run
by whooper » Tue, 2017-01-31 09:48
1
1,387 by Sergey
Tue, 2017-01-31 13:42
Normal topic residue selection / secondary structure constraints
by sharang » Thu, 2010-08-05 10:16
0
1,391 by sharang
Mon, 2014-04-21 06:47
Normal topic Non-standard amino acids
by mark.wilson » Mon, 2010-08-02 12:13
0
1,393 by mark.wilson
Mon, 2014-04-21 06:47
Normal topic Glycan minimization
by seanle24245 » Thu, 2016-10-06 13:51
1
1,397 by Labonte
Thu, 2016-10-06 14:05

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