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Rosetta 3 - Applications
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Creating model of 89-90 residues by ab initio methodology-help by krlitros87 » Sun, 2014-05-25 12:12 |
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2,198 |
by rmoretti Mon, 2014-05-26 09:29 |
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ddg_monomer and membrane proteins by afmo » Tue, 2014-05-20 02:37 |
4 |
5,553 |
by afmo Thu, 2014-05-22 01:19 |
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High energies after loopmodel run by michki » Thu, 2014-05-08 05:14 |
3 |
3,824 |
by rmoretti Mon, 2014-05-12 15:16 |
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Ligand docking: ERROR: set_atom_base: atoms must be bonded! by mengzhang » Mon, 2014-05-12 12:36 |
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2,557 |
by rmoretti Mon, 2014-05-12 15:08 |
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Unable to set up interface foldtree because there are no movable jumps - (antibody/antigen docking) by snorp » Mon, 2014-04-14 13:01 |
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3,747 |
by jadolfbr Mon, 2014-05-12 10:41 |
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How do I explicitly add residues for design in the interface optimization script? by ahonegger » Mon, 2014-05-12 07:40 |
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3,362 |
by ahonegger Mon, 2014-05-12 09:08 |
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clustering in RosettaRemodel by cheyuk » Wed, 2014-04-23 03:09 |
3 |
3,908 |
by rmoretti Mon, 2014-05-12 08:45 |
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Connecting linkers by Prasanth Kumar » Tue, 2014-05-06 00:53 |
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3,055 |
by smlewis Mon, 2014-05-12 08:32 |
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ambiguous constraints by shrutikhare » Mon, 2014-05-12 04:42 |
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3,288 |
by rmoretti Mon, 2014-05-12 08:25 |
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Scoring residue vs. organic ligand by almeida » Tue, 2014-04-08 12:18 |
12 |
13,331 |
by rmoretti Thu, 2014-04-24 14:43 |
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extract silent error - tag mismatch by shrutikhare » Thu, 2014-04-03 00:13 |
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6,785 |
by rmoretti Mon, 2014-04-21 10:47 |
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fixbb with symmetry error by Prasanth Kumar » Sun, 2014-01-26 10:56 |
4 |
5,320 |
by Prasanth Kumar Mon, 2014-04-21 06:48 |
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do mpi apps share memory? by fred » Thu, 2014-01-23 11:49 |
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3,266 |
by fred Mon, 2014-04-21 06:48 |
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Abinito for Multimers by Prasanth Kumar » Wed, 2014-01-22 17:45 |
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3,377 |
by Prasanth Kumar Mon, 2014-04-21 06:48 |
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Cannot get a negative score after relax by kxiao » Tue, 2014-01-28 22:28 |
6 |
7,636 |
by rmoretti Mon, 2014-04-21 06:48 |
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minirosetta: weird behavior by fred » Wed, 2014-01-22 05:57 |
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4,962 |
by fred Mon, 2014-04-21 06:48 |
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the flexpepdock refinement and ab-initio by tfliu » Mon, 2013-12-23 19:17 |
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6,194 |
by tfliu Mon, 2014-04-21 06:48 |
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rosetta's keyword list by fred » Tue, 2014-01-21 06:03 |
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2,656 |
by rmoretti Mon, 2014-04-21 06:48 |
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protein-protein docking with flexible backbone by tim » Fri, 2013-12-20 05:52 |
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4,286 |
by rmoretti Mon, 2014-04-21 06:48 |
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FlexPepDock and total score problem by tkellici » Fri, 2014-01-17 06:07 |
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3,165 |
by Ora Schueler-Furman Mon, 2014-04-21 06:48 |
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Ab-initio modeling on part of the protein by xiayanlawrence » Thu, 2013-12-19 07:45 |
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3,385 |
by rmoretti Mon, 2014-04-21 06:48 |
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Symmetry definition for coiled-coil dimer and trimer by kszczepaniak » Fri, 2013-10-11 05:33 |
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5,617 |
by kszczepaniak Mon, 2014-04-21 06:48 |
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Problem about energy score by tfliu » Tue, 2013-11-05 02:09 |
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7,491 |
by Ora Schueler-Furman Mon, 2014-04-21 06:48 |
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profit program in antibody design by tzhou » Tue, 2013-10-15 23:29 |
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2,786 |
by rmoretti Mon, 2014-04-21 06:48 |
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Score - Strange message by Ashafix » Wed, 2013-11-20 15:23 |
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3,425 |
by Ashafix Mon, 2014-04-21 06:48 |
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restrain residues in docking by albumns » Sat, 2013-11-02 08:52 |
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2,566 |
by jadolfbr Mon, 2014-04-21 06:48 |
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MaxSub and MaxSub2.0 by JadAbbass » Tue, 2013-10-15 13:36 |
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3,522 |
by JadAbbass Mon, 2014-04-21 06:48 |
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Make Fragments by Run » Mon, 2013-11-11 05:31 |
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2,608 |
by smlewis Mon, 2014-04-21 06:48 |
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symmetrical membrane modeling by rlwoltz » Tue, 2013-10-29 03:41 |
5 |
5,880 |
by jadolfbr Mon, 2014-04-21 06:48 |
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assymetric dymer modelling with comparative and ab initio by marcia » Mon, 2013-10-14 08:33 |
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4,751 |
by rmoretti Mon, 2014-04-21 06:48 |
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Symmetric docking with multiple chains as asymmetric unit by sarah29 » Tue, 2013-11-05 20:24 |
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3,141 |
by rmoretti Mon, 2014-04-21 06:48 |
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Comparative modeling by MRH » Mon, 2013-08-19 23:08 |
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2,395 |
by smlewis Mon, 2014-04-21 06:48 |
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Loop modelling before peptide docking by wsgosal » Tue, 2013-10-01 07:24 |
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5,143 |
by wsgosal Mon, 2014-04-21 06:48 |
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Error with FlexPepDock by aloshbau » Sat, 2013-08-10 11:51 |
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2,601 |
by rmoretti Mon, 2014-04-21 06:48 |
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homology membrane modeling demo in rosetta 3.5 by rlwoltz » Mon, 2013-09-09 10:26 |
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2,815 |
by smlewis Mon, 2014-04-21 06:48 |
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Full Protocol by shekhar » Fri, 2013-10-04 01:07 |
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2,957 |
by rmoretti Mon, 2014-04-21 06:48 |
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usage of score3 by Run » Sat, 2013-09-28 02:06 |
16 |
16,492 |
by jadolfbr Mon, 2014-04-21 06:48 |
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comparative modeling of protein-ligand complex by tevang » Mon, 2013-09-09 09:06 |
3 |
4,235 |
by rmoretti Mon, 2014-04-21 06:48 |
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Ligand atom RMSD calculation by lkrathn » Wed, 2013-08-14 21:25 |
2 |
4,557 |
by lkrathn Mon, 2014-04-21 06:48 |
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Problem with SymmDock in helical symmetry by mumdonar » Wed, 2013-09-18 03:59 |
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3,753 |
by mumdonar Mon, 2014-04-21 06:48 |
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submit_NGK.py not creating output files by nkato2 » Wed, 2013-08-28 23:37 |
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2,445 |
by rmoretti Mon, 2014-04-21 06:48 |
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rosetta.script segmentation fault by felipet » Wed, 2013-10-02 10:41 |
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5,881 |
by jadolfbr Mon, 2014-04-21 06:48 |
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RosettaRemodel can not work now? by myputer » Tue, 2013-08-13 16:56 |
7 |
7,283 |
by rmoretti Mon, 2014-04-21 06:48 |
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About scorefunction. by Run » Mon, 2013-09-09 23:08 |
7 |
7,282 |
by rmoretti Mon, 2014-04-21 06:48 |
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Loop prediction by yzhou » Thu, 2013-07-18 14:24 |
3 |
4,189 |
by jadolfbr Mon, 2014-04-21 06:48 |
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Ligand creation by Prasanth Kumar » Fri, 2013-08-02 09:48 |
1 |
2,374 |
by rmoretti Mon, 2014-04-21 06:48 |
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Unsatisfied interface H-bond in Ligand docking by Prasanth Kumar » Thu, 2013-07-18 12:04 |
1 |
4,063 |
by rmoretti Mon, 2014-04-21 06:48 |
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Error while running RosettaLigand by Ryhon Wang » Tue, 2013-07-30 02:51 |
4 |
4,955 |
by Ryhon Wang Mon, 2014-04-21 06:48 |
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A problem with RosettaLigand by Rosettasz » Fri, 2013-07-19 16:09 |
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18,501 |
by Rosettasz Mon, 2014-04-21 06:48 |
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Alanine Scanning by gjbartlett » Mon, 2013-08-05 07:02 |
1 |
3,543 |
by rmoretti Mon, 2014-04-21 06:48 |
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high-res docking by tfliu » Mon, 2013-07-15 02:49 |
2 |
3,222 |
by tfliu Mon, 2014-04-21 06:48 |
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Binding energy contribution broken down by residue by brspurri » Tue, 2013-07-23 12:47 |
1 |
2,748 |
by rmoretti Mon, 2014-04-21 06:48 |
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docking energies - deltadeltaG calculation by ast » Fri, 2013-07-19 07:30 |
5 |
9,571 |
by rmoretti Mon, 2014-04-21 06:48 |
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creating a model using a base pdb and extending a chain by rlwoltz » Fri, 2013-07-12 15:35 |
1 |
2,623 |
by nawsad Mon, 2014-04-21 06:48 |
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About loophash and batchrelax. by Run » Mon, 2013-07-22 23:54 |
14 |
12,693 |
by Run Mon, 2014-04-21 06:48 |
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strange effect in: SymDock.linuxgccrelease by ast » Tue, 2013-06-11 11:05 |
3 |
3,715 |
by ast Mon, 2014-04-21 06:48 |
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trouble in floppytail modelling by ytao » Thu, 2013-06-27 13:15 |
1 |
2,377 |
by ytao Mon, 2014-04-21 06:48 |
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select_best_unique_ligand_poses output by ast » Thu, 2013-07-11 02:33 |
2 |
3,206 |
by ast Mon, 2014-04-21 06:48 |
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interface_delta ligand_docking by Prasanth Kumar » Tue, 2013-06-18 08:37 |
1 |
2,582 |
by rmoretti Mon, 2014-04-21 06:48 |
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membrane modeling error by benniu2004 » Mon, 2013-07-01 17:59 |
1 |
2,433 |
by smlewis Mon, 2014-04-21 06:48 |
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Why is proline hydroxylated？ by kwonglynn » Tue, 2013-06-25 02:38 |
3 |
5,076 |
by rmoretti Mon, 2014-04-21 06:48 |
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pdb2vall by JadAbbass » Mon, 2013-07-08 12:11 |
3 |
3,765 |
by rmoretti Mon, 2014-04-21 06:48 |
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SymDock for docking only the ligand? by ast » Mon, 2013-06-17 09:53 |
4 |
5,219 |
by rmoretti Mon, 2014-04-21 06:48 |
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Protein-DNA Docking using RosettaScripts? by brspurri » Fri, 2013-06-07 09:06 |
1 |
4,332 |
by rmoretti Mon, 2014-04-21 06:48 |
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printing our per-residue energies including H-bonding energies by vijayan » Tue, 2013-07-02 08:51 |
2 |
3,643 |
by rmoretti Mon, 2014-04-21 06:48 |
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A question on the logic of enzyme design by agulsevin » Thu, 2013-06-13 08:10 |
2 |
3,920 |
by agulsevin Mon, 2014-04-21 06:48 |
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CSrosetta run problem by erin_cutts » Fri, 2013-06-28 09:52 |
2 |
3,600 |
by erin_cutts Mon, 2014-04-21 06:48 |
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Add missing residues in loop modeling by exchhattu » Thu, 2013-06-20 17:38 |
1 |
3,541 |
by smlewis Mon, 2014-04-21 06:48 |
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Discrepancy between the total pose energy and sum of per residue energies by vijayan » Tue, 2013-07-02 07:24 |
3 |
4,378 |
by rmoretti Mon, 2014-04-21 06:48 |
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ligand_docking_analysis by Prasanth Kumar » Thu, 2013-05-09 23:51 |
4 |
4,912 |
by rmoretti Mon, 2014-04-21 06:47 |
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No interface for protein - Interface Analyzer by aloshbau » Tue, 2013-05-21 21:00 |
1 |
2,754 |
by jarod Mon, 2014-04-21 06:47 |
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score and relax by Prasanth Kumar » Thu, 2013-05-02 05:09 |
1 |
3,222 |
by jadolfbr Mon, 2014-04-21 06:47 |
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modeling 4 linkers between 2 domains by pdbb » Thu, 2013-05-16 08:23 |
1 |
2,386 |
by smlewis Mon, 2014-04-21 06:47 |
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Problems with always_constrained_relax_script by wsgosal » Wed, 2013-05-29 04:39 |
3 |
4,623 |
by rmoretti Mon, 2014-04-21 06:47 |
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contents of span file by tevang » Mon, 2013-04-15 05:01 |
1 |
2,475 |
by smlewis Mon, 2014-04-21 06:47 |
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Relax with protein+complex by Prasanth Kumar » Wed, 2013-05-08 23:16 |
4 |
5,540 |
by Prasanth Kumar Mon, 2014-04-21 06:47 |
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Error when running cluster by aloshbau » Wed, 2013-05-01 20:45 |
3 |
4,492 |
by rmoretti Mon, 2014-04-21 06:47 |
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deltaG calculations by Prasanth Kumar » Wed, 2013-05-15 07:06 |
3 |
6,223 |
by rmoretti Mon, 2014-04-21 06:47 |
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ddG filter gives deltaG calculation number? by jarod » Tue, 2013-05-28 23:43 |
2 |
3,812 |
by jarod Mon, 2014-04-21 06:47 |
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number of structures in homology modeling for cluster analysis by pdbb » Fri, 2013-04-12 08:52 |
1 |
2,580 |
by smlewis Mon, 2014-04-21 06:47 |
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docking with constraints by talavera » Tue, 2013-05-07 01:50 |
1 |
3,962 |
by rmoretti Mon, 2014-04-21 06:47 |
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mover "RepackMinimize" does not support chains > 2? by jarod » Mon, 2013-05-20 02:17 |
6 |
7,288 |
by jarod Mon, 2014-04-21 06:47 |
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Problems when running Rosetta VIP with cofactors by Basantab » Fri, 2013-04-26 13:31 |
14 |
14,469 |
by Basantab Mon, 2014-04-21 06:47 |
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Modeling flexible linkers with Floppytail by pdbb » Sun, 2013-05-12 15:55 |
2 |
3,165 |
by smlewis Mon, 2014-04-21 06:47 |
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Pepspec Errors running 3.4 by rrphenix » Tue, 2013-05-28 12:08 |
4 |
4,239 |
by rmoretti Mon, 2014-04-21 06:47 |
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make_rot_lib issue by jarek » Thu, 2013-04-11 08:21 |
4 |
4,787 |
by smlewis Mon, 2014-04-21 06:47 |
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in silico affinity maturation design by jarod » Mon, 2013-05-20 02:07 |
11 |
12,063 |
by jarod Mon, 2014-04-21 06:47 |
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PDB format for RosettaDNA by brspurri » Thu, 2013-05-30 11:21 |
5 |
6,262 |
by brspurri Mon, 2014-04-21 06:47 |
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Error when running Remodel with EnzDes constraint file by aloshbau » Wed, 2013-04-17 22:23 |
2 |
3,892 |
by aloshbau Mon, 2014-04-21 06:47 |
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comparative modelling and broker by felipet » Tue, 2013-02-05 08:33 |
4 |
4,177 |
by smlewis Mon, 2014-04-21 06:47 |
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[TopologyBroker Exception]: BBTorsion at pos 468unitialized...unclaimed by tevang » Wed, 2013-04-10 15:07 |
5 |
4,673 |
by rmoretti Mon, 2014-04-21 06:47 |
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Running RosettaHoles2 by weehee » Wed, 2013-02-13 09:35 |
3 |
3,572 |
by weehee Mon, 2014-04-21 06:47 |
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membrane scoring function performance by tevang » Wed, 2013-03-20 08:40 |
15 |
14,635 |
by smlewis Mon, 2014-04-21 06:47 |
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symmetric fixbb design with design_hpatch by sdh_h » Sat, 2013-02-02 01:48 |
2 |
2,832 |
by ronj Mon, 2014-04-21 06:47 |
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Results of enzyme_design not consistent with Resfile by yogeshkd » Thu, 2013-02-14 15:56 |
6 |
6,335 |
by yogeshkd Mon, 2014-04-21 06:47 |
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dihedral_between_bonded_children: atoms are not both my children! by pdbb » Fri, 2013-04-05 06:40 |
3 |
3,212 |
by smlewis Mon, 2014-04-21 06:47 |
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ligand conformer generation for enzyme design by bo » Mon, 2013-02-11 16:51 |
1 |
2,370 |
by smlewis Mon, 2014-04-21 06:47 |
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Reproducing the exact result using information from previos run by nawsad » Thu, 2013-03-14 12:05 |
2 |
2,536 |
by nawsad Mon, 2014-04-21 06:47 |
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Docking with constraints by ytao » Tue, 2013-04-02 09:45 |
6 |
7,788 |
by smlewis Mon, 2014-04-21 06:47 |
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Multiple ligands in enzyme design application by yogeshkd » Mon, 2013-02-11 10:13 |
4 |
5,149 |
by yogeshkd Mon, 2014-04-21 06:47 |
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