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Rosetta 3 - General

Topic / Topic startersort descending Replies Views Last post
Normal topic pyRosetta problem
by exchhattu » Sun, 2010-07-25 22:25
0
1,313 by exchhattu
Mon, 2014-04-21 06:47
Normal topic pyrosetta.rosetta.core.pose.rna
by chenjief » Tue, 2021-11-23 07:03
3
1,120 by matteoferla
Mon, 2022-01-10 06:44
Normal topic python problem?
by albumns » Fri, 2012-03-02 11:03
1
1,900 by albumns
Mon, 2014-04-21 06:47
Normal topic Quesition about Relax Mode
by crysta11 » Wed, 2009-10-21 09:57
3
3,211 by smlewis
Mon, 2014-04-21 06:47
Normal topic Question about CartesianMD
by orionshih » Sun, 2018-04-29 21:07
2
1,671 by orionshih
Tue, 2018-05-01 21:16
Normal topic Question about FlexPepDock score
by aelatico » Thu, 2018-07-19 20:39
1
1,357 by rmoretti
Wed, 2018-08-01 16:04
Normal topic Question about homology modelling
by DmitriiN » Sun, 2016-08-21 13:44
3
3,127 by smlewis
Mon, 2016-08-22 10:28
Normal topic question about protein docking results
by albumns » Thu, 2010-11-25 08:19
1
1,948 by smlewis
Mon, 2014-04-21 06:47
Normal topic Question about remodelling
by tonycheng1688 » Mon, 2022-04-25 13:51
0
289 by tonycheng1688
Mon, 2022-04-25 13:51
Normal topic Question about run FLEXPEPDOCK with 3 chain
by phanvy » Wed, 2014-07-02 08:46
3
3,053 by phanvy
Wed, 2014-07-02 23:32
Normal topic question about scoring silent output files and their contents
by burkheadlab » Wed, 2011-07-27 16:28
2
2,919 by rmoretti
Mon, 2014-04-21 06:47
Normal topic question about the exposed strand results in beta_strand_homodimer_design demo
by szypanther » Wed, 2014-06-04 00:47
1
1,944 by rmoretti
Mon, 2014-06-09 10:05
Normal topic Question about wrong homology design
by mony2182 » Fri, 2014-07-04 10:26
1
2,058 by rmoretti
Mon, 2014-07-07 08:08
Normal topic Question on eval_atom_derivative function.
by Al52 » Thu, 2015-12-03 16:17
7
5,785 by rmoretti
Thu, 2016-02-04 09:29
Normal topic Question regarding buried or exposed residues
by qlj » Fri, 2012-11-09 23:43
5
5,844 by qlj
Mon, 2014-04-21 06:47
Normal topic Question regarding Mlipo score
by DanielK » Tue, 2012-05-29 02:04
4
4,209 by smlewis
Mon, 2014-04-21 06:47
Normal topic questions about ab init membrane protein
by albumns » Mon, 2011-02-07 01:09
5
4,712 by zeynep
Mon, 2014-04-21 06:47
Normal topic Questions about alanine scanning in Rosetta
by LTJ » Mon, 2020-07-06 14:13
0
739 by LTJ
Mon, 2020-07-06 14:13
Normal topic Questions about Monte Carlo Simulated Annealing algorithm in the design protocols
by mdyini » Thu, 2012-05-31 12:39
3
5,138 by smlewis
Mon, 2014-04-21 06:47
Normal topic Questions about rosetta fragment library ranking and fragment conformation sampling algorithm
by mdyini » Thu, 2011-05-19 17:34
3
4,087 by dgront
Mon, 2014-04-21 06:47
Normal topic Questions on energy oddities
by pachecoj » Wed, 2014-10-15 13:26
2
2,325 by pachecoj
Wed, 2014-10-15 15:12
Normal topic Questions regarding fragmentation using Robetta
by ahmadkhalifa » Thu, 2018-06-28 13:24
1
1,216 by smlewis
Thu, 2018-06-28 13:34
Normal topic Quick mysql output question
by pedro.guillem » Thu, 2020-07-23 03:45
0
603 by pedro.guillem
Thu, 2020-07-23 03:45
Normal topic Radius of Gyration
by ctaylor » Mon, 2009-09-21 12:45
2
3,718 by ctaylor
Mon, 2014-04-21 06:47
Normal topic rama energy term and explicit zero
by SergeyP » Sat, 2015-12-19 05:25
2
2,464 by SergeyP
Sun, 2015-12-20 01:44
Normal topic rama vs p_aa_pp vs ref score terms
by jharamesh » Thu, 2015-12-03 14:24
1
2,924 by rmoretti
Thu, 2015-12-03 15:14
Normal topic Random seed confusion
by pardave » Mon, 2012-11-12 09:45
4
4,132 by pardave
Mon, 2014-04-21 06:47
Normal topic RASREC - finding lowest energy structure
by Lati » Fri, 2015-11-20 03:08
2
2,403 by Lati
Tue, 2016-01-12 13:28
Normal topic RASREC full_run vs. test_run
by Lati » Wed, 2015-10-28 03:26
1
1,829 by Lati
Fri, 2015-11-20 03:32
Normal topic ratio of conformers and docking output
by pramod » Fri, 2014-12-12 12:54
1
2,006 by rmoretti
Mon, 2014-12-15 02:37
Normal topic Re: Basic python scripts for File Manipulation
by bharat_46010 » Mon, 2011-03-14 19:44
1
3,007 by smlewis
Mon, 2014-04-21 06:47
Hot topic RE: Loop Modeling and Beta-strand design
by bharat_46010 » Sun, 2012-02-12 16:34
19
14,452 by smlewis
Mon, 2014-04-21 06:47
Hot topic Re: Multigraft
by bharat_46010 » Wed, 2011-12-07 17:24
35
28,125 by rmoretti
Mon, 2014-04-21 06:47
Normal topic Re: Protein-RNA interface design
by bharat_46010 » Tue, 2015-04-07 04:44
9
7,807 by rmoretti
Mon, 2015-06-01 15:27
Hot topic Re: Using a database of loop conformations together with de novo folding protocol (Page: 1, 2)
by bharat_46010 » Mon, 2013-03-25 01:47
55
48,338 by bharat_46010
Mon, 2014-04-21 06:47
Normal topic Read svn acces or acces to developmen version of rosetta
by knutjbj » Thu, 2010-12-09 17:06
1
2,149 by smlewis
Mon, 2014-04-21 06:47
Normal topic Reading chloride anions
by Martin Floor » Mon, 2018-08-27 14:29
2
1,930 by Martin Floor
Tue, 2018-08-28 13:21
Normal topic Reading FE from 2PAH
by jadolfbr » Tue, 2013-01-29 16:10
5
5,688 by rmoretti
Mon, 2014-04-21 06:47
Normal topic reading of AtomPair failed in relax with constraint
by hajar » Wed, 2020-06-10 10:02
0
1,018 by hajar
Wed, 2020-06-10 11:17
Normal topic rebuilding and refinement
by exchhattu » Tue, 2009-10-06 21:13
1
1,808 by smlewis
Mon, 2014-04-21 06:47
Normal topic Recommendations for CoupledMoves enzyme redesign
by dgm3 » Thu, 2021-03-04 10:53
1
947 by aloshbau
Tue, 2021-03-09 02:47
Normal topic recommended function type for cross links data
by meravb » Sun, 2018-08-05 06:57
2
1,589 by rmoretti
Mon, 2018-08-20 11:51
Normal topic redesign a enzyme by fixing the active site
by Lindsay » Wed, 2012-03-07 08:23
2
2,692 by Lindsay
Mon, 2014-04-21 06:47
Normal topic ref2015: approx. kcal/mol or actually kJ/mol?
by matteoferla » Thu, 2021-10-07 04:04
2
1,141 by matteoferla
Thu, 2021-10-07 09:31
Normal topic Refinement of a PDB structure containing multiple models
by ahmadkhalifa » Wed, 2018-04-18 07:44
3
2,206 by smlewis
Wed, 2018-04-18 19:03
Normal topic relax - P6G molecule
by allan.ferrari » Wed, 2016-11-30 05:01
3
2,567 by allan.ferrari
Tue, 2017-01-03 05:02
Normal topic Relax command for docking purposes and cluster_vs_rmsd command
by Rkfoury » Wed, 2015-04-01 08:48
5
4,927 by rmoretti
Sat, 2015-04-25 10:05
Normal topic relax from a silent input file
by mintseris » Thu, 2010-04-29 19:54
2
2,656 by mintseris
Mon, 2014-04-21 06:47
Normal topic relax NOT CONVERGED
by albumns » Thu, 2010-06-24 21:25
3
2,880 by smlewis
Mon, 2014-04-21 06:47
Normal topic Relax output mmCIF file to a particular path
by AJVincelli » Sun, 2018-11-25 11:04
1
1,223 by AJVincelli
Sun, 2018-11-25 11:09
Normal topic Relax protocol details for Rosetta 3.1
by Matthys » Sun, 2012-01-15 10:00
4
3,885 by rmoretti
Mon, 2014-04-21 06:47
Normal topic Relax protocoll short pdb of AAA petide
by knutjbj » Wed, 2011-01-26 05:01
5
4,241 by smlewis
Mon, 2014-04-21 06:47
Normal topic Relax Refinement for complecated targets
by jiongzhang » Fri, 2012-01-20 09:57
10
6,959 by jiongzhang
Mon, 2014-04-21 06:47
Normal topic relax structure before design?
by Lindsay » Tue, 2013-11-05 20:50
7
8,847 by rmoretti
Mon, 2014-04-21 06:48
Normal topic Relax structure using Membrane Environment Scoring Function
by anna.duncan » Thu, 2010-02-04 08:01
6
7,195 by jruhym
Mon, 2014-04-21 06:47
Normal topic relax with restraints
by jtmacd » Mon, 2010-11-08 09:11
2
2,497 by jtmacd
Mon, 2014-04-21 06:47
Normal topic Remodel and the depracated EMPTY NC
by matteoferla » Fri, 2021-02-26 07:12
0
758 by matteoferla
Fri, 2021-02-26 07:12
Normal topic Remodel introduces clashes when stitching
by achambe » Thu, 2016-08-25 17:51
1
1,501 by possu
Tue, 2016-08-30 16:57
Normal topic Remote access to Rosetta on Blue Gene or another HPC system?
by rfieldhouse » Mon, 2011-05-16 08:40
10
8,252 by rfieldhouse
Mon, 2014-04-21 06:47
Normal topic Renumbering PDB
by jgustat » Wed, 2022-07-27 13:37
2
419 by jgustat
Thu, 2022-07-28 10:00
Normal topic Repeated entries in silent file
by almeida85 » Fri, 2022-08-05 02:52
4
529 by almeida85
Thu, 2022-08-11 00:29
Normal topic Repeating sequence in Rosetta de novo protein folding
by orionshih » Wed, 2018-02-07 20:52
2
1,720 by sheehajh
Thu, 2018-02-08 21:18
Normal topic replace a short helix
by berk » Wed, 2013-06-05 10:19
1
1,732 by rmoretti
Mon, 2014-04-21 06:48
Normal topic reporting IteratedConvergence status
by sdh_h » Thu, 2016-08-04 10:05
2
2,106 by sdh_h
Thu, 2016-08-04 11:22
Normal topic Reproducing Robetta AB initio setup
by jason-rosetta » Sat, 2014-10-04 04:26
1
2,015 by jadolfbr
Fri, 2014-10-31 08:55
Normal topic Reproducing Rosetta++ scoring function with Rosetta 3?
by JuliusSu » Mon, 2014-03-17 21:15
7
6,333 by JuliusSu
Wed, 2014-03-19 20:38
Normal topic rerun same experiment on MPI.
by exchhattu » Tue, 2010-02-23 21:14
7
6,186 by exchhattu
Mon, 2014-04-21 06:47
Normal topic Rescoring protein docking decoys to get Irms
by lj269 » Thu, 2014-10-23 13:23
3
3,623 by rmoretti
Wed, 2014-10-29 14:30
Normal topic Rescoring regions of structures
by erin_cutts » Mon, 2013-07-22 04:43
2
2,657 by erin_cutts
Mon, 2014-04-21 06:48
Normal topic Resfile
by vijayaraj81 » Thu, 2014-02-27 01:14
8
7,661 by vijayaraj81
Tue, 2014-03-04 05:07
Normal topic Resfile for fixed backbone design
by dyq » Wed, 2009-10-07 10:50
5
4,545 by attesor
Mon, 2014-04-21 06:47
Normal topic Residue not found in pose
by lzx32 » Fri, 2011-09-09 03:42
1
2,435 by rmoretti
Mon, 2014-04-21 06:47
Normal topic Residue outside res_map range
by amcallister » Fri, 2022-04-22 11:26
1
408 by aneeqh
Fri, 2022-09-02 13:36
Normal topic Residue outside res_map range
by to-qinbin@163.com » Sat, 2022-09-10 01:56
1
373 by rmoretti
Mon, 2022-09-12 07:01
Normal topic Residue variant types and fragments
by jadolfbr » Mon, 2013-01-21 09:01
2
2,886 by jadolfbr
Mon, 2014-04-21 06:47
Normal topic restrain multiple portions of proteins with MinMover
by Karol » Wed, 2016-09-07 08:29
4
4,151 by rmoretti
Thu, 2016-09-08 10:56
Normal topic restrict PackRotamersMover
by pmit » Thu, 2018-05-03 01:48
0
823 by pmit
Thu, 2018-05-03 01:48
Normal topic restricting space in a design
by ast » Tue, 2012-01-17 06:31
2
2,355 by rmoretti
Mon, 2014-04-21 06:47
Normal topic RestrictToRepackingRLT and PreventRepackingRLT
by coomteng@gmail.com » Mon, 2018-03-05 11:19
2
2,013 by coomteng@gmail.com
Tue, 2018-03-06 02:31
Normal topic RifDock building error on Ubuntu 20.04,please help!
by guowuchen » Mon, 2022-03-28 03:53
2
958 by guowuchen
Wed, 2022-03-30 04:20
Normal topic RifGen error on rosetta, "assertion failed", please help!
by guowuchen » Thu, 2022-05-05 06:20
1
610 by sia
Tue, 2022-07-05 05:47
Normal topic Rigid Body & Flexible Minimization
by Hanieh » Thu, 2014-02-06 12:37
2
3,460 by Hanieh
Fri, 2014-02-28 12:43
Normal topic RMS in Score Application
by brspurri » Thu, 2011-12-29 09:19
1
3,759 by smlewis
Mon, 2014-04-21 06:47
Normal topic RMSD filter
by Soler » Sat, 2022-01-15 22:09
0
486 by Soler
Sat, 2022-01-15 22:09
Normal topic RNA & protein folding
by sdh » Thu, 2009-12-17 00:58
0
1,396 by sdh
Mon, 2014-04-21 06:47
Normal topic RNA add/modify residues
by galvaner » Fri, 2015-09-18 05:49
1
1,672 by rmoretti
Sat, 2015-09-19 13:20
Hot topic RNA Denovo RMSD data
by eremma » Thu, 2012-08-02 01:40
31
23,458 by eremma
Mon, 2014-04-21 06:47
Normal topic RNA Parameter File
by hdavis9 » Tue, 2010-07-06 11:36
4
3,398 by smlewis
Mon, 2014-04-21 06:47
Normal topic RNA update library
by Anne Klein » Mon, 2022-05-16 16:04
2
530 by Anne Klein
Tue, 2022-05-24 21:38
Normal topic rna_denovo and minize_rna
by frits » Wed, 2013-07-10 00:22
2
2,652 by frits
Mon, 2014-04-21 06:48
Normal topic rna_denovo secstruct_general function
by rvandamme » Mon, 2021-02-01 13:39
0
633 by rvandamme
Mon, 2021-02-01 13:39
Normal topic Robetta fragments and silent.out-file
by masterofpuppets » Wed, 2015-01-07 04:28
5
5,627 by masterofpuppets
Tue, 2015-02-10 03:15
Normal topic Robetta nstruct number
by ac.research » Tue, 2017-01-31 14:27
1
1,530 by rmoretti
Thu, 2017-02-02 08:52
Normal topic Rosetta (antibody_designer) performance
by Kihang _Youn » Wed, 2022-03-02 00:48
7
1,392 by Kihang _Youn
Thu, 2022-03-10 16:30
Normal topic Rosetta 3.1 compile error, Linux 32 bit
by viochemist » Thu, 2010-07-29 08:40
11
11,082 by smlewis
Mon, 2014-04-21 06:47
Normal topic rosetta 3.1 recognizes PO4 group in dockinglocalrefine option?
by nilkoeg » Thu, 2011-03-10 23:19
4
4,775 by nilkoeg
Mon, 2014-04-21 06:47
Normal topic Rosetta 3.1 seg faults gcc while compiling on Fedora 11
by jtmacd » Fri, 2009-10-02 05:26
1
2,030 by smlewis
Mon, 2014-04-21 06:47
Normal topic rosetta 3.1-how to run parallel tasks?
by wtscrystal » Fri, 2009-11-06 03:23
4
5,160 by lqzhang
Mon, 2014-04-21 06:47
Normal topic Rosetta ab initio with disordered regions
by smiruthi » Thu, 2011-12-15 14:37
2
2,606 by smiruthi
Mon, 2014-04-21 06:47
Normal topic Rosetta and design of ligand binding site
by rohi » Mon, 2021-03-15 06:00
0
697 by rohi
Mon, 2021-03-15 06:31
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Hot topic without new posts
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