I want to dock two proteins. I have some constraints between residues of different chain (here chain A and B).
For residues number 15 of chain A, and residue number 271 of chain B, I have the following information:
The minimum distance between residues is 0, and the maximum distance is 6.
How can I add constrain for something like this case (I mean when residues are in different chain)? How can I specify that residues are in diffrent chain?
Thank you very much