Hello everyone! I'm trying to run a command in paper_interface_design_pilot_1000_commands.list generated in step 12 “Running a pilot job”
the commands are as follows:
cd /home/cooben/rosettatest/rosetta_src_2018.09.60072_bundle/main/source/paper_interface_design_pilot_1000/00000
Hello! I'm quite new to (Py)Rosetta, so my question may have a very obvious answer, but I tried to find it in many places but couldn't find it, so I figured this was a good place to ask.
Hello!
I am trying to run the default XML script to change the specificity of a protein so that it binds to a DNA sequence of interest. For this I am referring to the book Redesigning the specificity of protein-DNA interactions with Rosetta
Thyme S, Baker D. Redesigning the specificity of protein-DNA interactions with Rosetta. Methods Mol Biol. 2014;1123:265-82. doi: 10.1007/978-1-62703-968-0_17. PMID: 24510272.
However I am getting the following error message.
I have an institutional email address: katarzyna.nowis@hirszfeld.pl. I am a post-doc at Hirszfeld Institute of Immunology and Experimental Therapy Polish Academy of Sciences. I would like to use the server for academic purpose only.
hello gus,
When i use catesian-ddg for protein stability, i want saturation site by all amino acied. but I Set "1 A ALLAA" OR "C 1 ALLAA"(first site is cys), all error.
and i type "total 9
1
C 1 A
1
C 1 W
1
C 1 F
1
C 1 I
..... " Enumerative method is OK. So， how I set mutfile more easy and clearly ? help!
Hi! When I tried to do more motif extraction , I ran into this error:
Hello,
I would like my academic email to be validated. Institute: RadboudUMC and domain: @radboudumc.nl
Best,
Charbel
