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Compilation

move to high performance computer

Category: 
Compilation

 

I compiled Rosetta in my local computer successfully and It can runs.

I just upload the local compiled Rosetta to server, When I run the H3-modeling in log file I got error " ~/rosetta/main/source/bin/antibody_H3.linuxclangrelease: error while loading shared libraries: libcppdb.so: cannot open shared object file: No such file or directory"

Do I need to compile again in server?

Post Situation: 

errors during test rosetta_2017.39.59729

Category: 
Compilation

I have compiled the newest version of rosetta3 in centos7 without any problem. After installation, I was testing the rosetta. Some errors occur. Could any one give me some suggestions?

Thank you for taking your time.

I have attached the test.log below.

 

 

 

Post Situation: 

Error compiling pyrosetta

Category: 
Compilation

Hi,

I'm running into an issue when trying to compile pyrosetta from source.  I'm following these directions:

http://www.pyrosetta.org/documentation#TOC-Building-PyRosetta-from-source

Those directions worked for me when I was using rosetta3.8.

I recently downloaded rosetta_src_2017.39.59729_bundle and get this issue:

>pwd

/opt/software/rosetta/rosetta_src_2017.39.59729_bundle/main/source/src/python/PyRosetta

Post Situation: 

Deleting ones "own" guest job a to reduce server load

Category: 
Compilation

Hi!

First, I want to thank you for giving us allowance to run  your excelent scientific codes on  the servers you provide. I also apologize if this is off-topic, but i was wondering if a guest could remove erroranous submissions before they are started? This is happenned recently and we dont wish to overload your servers.

 

Bests

Post Situation: 

compilation rosetta in ubuntu 16.04, please help

Category: 
Compilation

Anyone use unbuntu 16.04?

I installed  gcc-6 , g++6,  scons-2.51.  all install correctly. as I checked -- version all correct.

 

option1, when I compile the Roseta source code ( Version 3.8)

$ ./scons.py -j 4 mode=release bin

The program runs long time. but at the last I got

usr/bin/ld: cannot find -lz

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