DockingHighResLegacy repacks all sidechains on first apply(), interface sidechains on subsequent apply()
[Using PyRosetta.ScientificLinux-r47452.64Bit]
docker = DockingHighResLegacy(jump, scoreFxn)
docker.apply(pose)
When I use the above in a python script, I get:
...
protocols.docking.DockingHighRes: in DockingHighRes.apply
protocols.docking.DockingHighRes: ::::::::::::::::::DOCK_MCM:::::::::::::::::::
core.pack.task: Packer task: initialize from command line()
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 4141 rotamers at 256 positions.
...