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| Topic / Topic starter | Replies | Views |
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∆G calculation script for protein and mutation of AA at each residue by ara » Tue, 2011-10-25 13:57 |
6 |
8,029 |
by ara Mon, 2014-04-21 06:47 |
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how to use constrains in PyRosetta? by ast » Mon, 2011-09-05 07:22 |
0 |
2,093 |
by ast Mon, 2014-04-21 06:47 |
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Errors when movers put in a function by rfschleif » Sat, 2011-10-08 08:41 |
5 |
4,917 |
by msellers Mon, 2014-04-21 06:47 |
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input_pdb by evo_umich » Sat, 2011-10-01 14:20 |
3 |
4,577 |
by evo_umich Mon, 2014-04-21 06:47 |
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PyRosetta license by AOK » Fri, 2011-11-11 01:20 |
1 |
2,425 |
by JeffreyGray Mon, 2014-04-21 06:47 |
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Neutralize the C and N termini by rosettauser » Mon, 2011-07-25 07:24 |
1 |
2,583 |
by smlewis Mon, 2014-04-21 06:47 |
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Creating a vector1 of AtomID objects by msellers » Mon, 2011-07-18 06:24 |
19 |
16,634 |
by msellers Mon, 2014-04-21 06:47 |
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Using pose.set_xyz() to move chains causes increase in only pro_close energy by msellers » Mon, 2011-07-25 06:57 |
3 |
4,306 |
by msellers Mon, 2014-04-21 06:47 |
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(1) Score pose, (2) move atom, (3) score pose by msellers » Fri, 2011-07-15 11:04 |
6 |
5,930 |
by msellers Mon, 2014-04-21 06:47 |
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how to realize a free bb design? PackMover=fixed bb! by ast » Wed, 2011-08-31 09:41 |
1 |
3,420 |
by rmoretti Mon, 2014-04-21 06:47 |
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Foldtree setup, jump problem in PyRosetta 2.0 by msellers » Thu, 2011-07-21 12:00 |
2 |
3,923 |
by msellers Mon, 2014-04-21 06:47 |
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Charmm, hydroxyproline, hydrogen atom ID by rfschleif » Tue, 2011-07-12 11:26 |
1 |
3,502 |
by rfschleif Mon, 2014-04-21 06:47 |
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protein structure prediction by ravi1709 » Thu, 2011-07-28 00:05 |
1 |
2,476 |
by smlewis Mon, 2014-04-21 06:47 |
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read parameters of metal ions by Stefan » Tue, 2011-07-19 08:38 |
2 |
4,025 |
by Stefan Mon, 2014-04-21 06:47 |
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Deprotonated LYS by Arik » Wed, 2011-06-22 16:34 |
3 |
4,585 |
by smlewis Mon, 2014-04-21 06:47 |
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Failure appending a residue by rfschleif » Thu, 2011-06-16 10:53 |
2 |
3,710 |
by smlewis Mon, 2014-04-21 06:47 |
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Deleting residue one produces a segmentation fault by rfschleif » Thu, 2011-06-16 07:02 |
1 |
2,308 |
by smlewis Mon, 2014-04-21 06:47 |
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Jump question by rfschleif » Wed, 2011-06-15 14:00 |
1 |
2,735 |
by smlewis Mon, 2014-04-21 06:47 |
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Pyrosetta energy function by somayyehzangooei » Mon, 2011-05-09 08:20 |
6 |
7,784 |
by smlewis Mon, 2014-04-21 06:47 |
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Minimization question by rfschleif » Wed, 2011-05-25 06:59 |
14 |
12,760 |
by Sergey Mon, 2014-04-21 06:47 |
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Define custom potential? by rfschleif » Fri, 2011-05-06 11:25 |
2 |
3,679 |
by weitzner Mon, 2014-04-21 06:47 |
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Pyrosetta 2.0 - Dunbrak library binary not loading - strange repacking score by msellers » Wed, 2011-05-11 06:24 |
3 |
4,117 |
by smlewis Mon, 2014-04-21 06:47 |
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Dunbrack Library by jadolfbr » Tue, 2011-05-10 13:59 |
3 |
4,025 |
by weitzner Mon, 2014-04-21 06:47 |
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SequenceRelax on a loop by jtmacd » Mon, 2011-04-11 07:53 |
15 |
13,001 |
by ñ Mon, 2014-04-21 06:47 |
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interaction energies between atoms by Stefan » Thu, 2011-04-14 06:15 |
3 |
5,724 |
by smlewis Mon, 2014-04-21 06:47 |
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adding coordinate constraints by jtmacd » Tue, 2011-04-12 04:51 |
11 |
11,519 |
by jtmacd Mon, 2014-04-21 06:47 |
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Pyrosetta2 by bharat_46010 » Mon, 2011-02-28 05:00 |
1 |
2,485 |
by Sergey Mon, 2014-04-21 06:47 |
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Strange fold tree problem with classic and fast relax by jadolfbr » Mon, 2011-03-21 11:58 |
4 |
5,056 |
by jadolfbr Mon, 2014-04-21 06:47 |
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JobDistributor Bug by brettth » Fri, 2011-03-11 07:00 |
1 |
3,136 |
by smlewis Mon, 2014-04-21 06:47 |
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Windows version of PyRosetta 2.0 is ready for download! by Sergey » Fri, 2011-02-11 15:58 |
0 |
1,769 |
by Sergey Mon, 2014-04-21 06:47 |
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How to fold membrane protein in PyRosetta? by assignfit » Fri, 2011-02-25 21:39 |
3 |
4,036 |
by assignfit Mon, 2014-04-21 06:47 |
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Rosetta Docking server by hourosetta » Fri, 2011-02-11 08:36 |
1 |
3,286 |
by smlewis Mon, 2014-04-21 06:47 |
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Concatenate Pose by jadolfbr » Sat, 2011-02-19 21:12 |
8 |
8,840 |
by smlewis Mon, 2014-04-21 06:47 |
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PyRosetta 2.0 Beta Strand Build by Qulprit » Tue, 2011-02-08 11:30 |
1 |
7,175 |
by weitzner Mon, 2014-04-21 06:47 |
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Username and Password for download link? by juden99 » Thu, 2011-02-17 03:30 |
3 |
3,782 |
by juden99 Mon, 2014-04-21 06:47 |
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Peptide design by AOK » Thu, 2011-02-03 11:35 |
3 |
4,628 |
by smlewis Mon, 2014-04-21 06:47 |
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How to set options under PyRosetta by lennylv » Thu, 2011-01-06 18:11 |
1 |
3,610 |
by Sergey Mon, 2014-04-21 06:47 |
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The Beta version of PyRosetta 2.0 is ready for download! by Sergey » Mon, 2011-01-24 10:12 |
9 |
8,037 |
by drluca77 Mon, 2014-04-21 06:47 |
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Segmentation fault when reading VMD PDB by msellers » Mon, 2011-01-03 07:14 |
6 |
8,848 |
by smlewis Mon, 2014-04-21 06:47 |
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Executing the mc simulation of polyalanine fragment by bharat_46010 » Mon, 2011-01-17 19:18 |
8 |
7,847 |
by smlewis Mon, 2014-04-21 06:47 |
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De novo loop modeling using pyrosetta by bharat_46010 » Sun, 2011-01-16 17:38 |
4 |
5,536 |
by Sergey Mon, 2014-04-21 06:47 |
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Interface Design by brettth » Wed, 2010-12-08 07:25 |
2 |
4,860 |
by SunH Mon, 2014-04-21 06:47 |
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Specifying disulfide bonds by msellers » Thu, 2010-12-02 10:38 |
1 |
3,863 |
by msellers Mon, 2014-04-21 06:47 |
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Units of kT for MC mover by msellers » Fri, 2010-12-10 05:40 |
1 |
3,769 |
by smlewis Mon, 2014-04-21 06:47 |
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fragment for polyAAA by knutjbj » Mon, 2010-11-29 08:23 |
1 |
2,363 |
by smlewis Mon, 2014-04-21 06:47 |
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Fold tree not correct for multi-chain partners by msellers » Fri, 2010-12-10 05:35 |
6 |
6,767 |
by msellers Mon, 2014-04-21 06:47 |
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Constraint files, section formatted by srballard » Fri, 2010-11-05 11:55 |
2 |
2,802 |
by drluca77 Mon, 2014-04-21 06:47 |
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Adding energies of residues doesnt add up to energy of the entire protein by astrofunk » Tue, 2010-09-14 11:24 |
1 |
3,050 |
by smlewis Mon, 2014-04-21 06:47 |
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Fundamental methods: pose.residue().total_atom(), pose.atom(#) ? by msellers » Mon, 2010-11-01 10:53 |
1 |
2,487 |
by smlewis Mon, 2014-04-21 06:47 |
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Boost.Python C++/PyRosetta interop by gipsonb » Wed, 2010-10-06 15:15 |
1 |
2,633 |
by gipsonb Mon, 2014-04-21 06:47 |
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ClassicRelax with ligand by S » Mon, 2010-09-27 07:55 |
1 |
2,116 |
by smlewis Mon, 2014-04-21 06:47 |
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residue selection / secondary structure constraints by sharang » Thu, 2010-08-05 10:16 |
0 |
1,758 |
by sharang Mon, 2014-04-21 06:47 |
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Parallel processing? by mark.wilson » Mon, 2010-07-26 15:12 |
6 |
11,305 |
by msellers Mon, 2014-04-21 06:47 |
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undefined symbol: PyUnicodeUCS4_FromEncodedObject (from libboost_python-mt-py26.so.1.38.0) by embl-structures » Thu, 2010-08-05 05:02 |
1 |
21,180 |
by embl-structures Mon, 2014-04-21 06:47 |
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Question Regarding Usage of Specific Rosetta Tools in PyRosetta by jurkm » Thu, 2010-07-22 23:54 |
0 |
1,625 |
by jurkm Mon, 2014-04-21 06:47 |
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dG(partner) and ddG(bind) by levinthal » Sat, 2010-08-21 17:04 |
2 |
5,413 |
by smlewis Mon, 2014-04-21 06:47 |
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small molecule docking by sharang » Mon, 2010-08-02 14:57 |
0 |
1,802 |
by sharang Mon, 2014-04-21 06:47 |
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Weird message whenever I try to calculate energies by astrofunk » Fri, 2010-08-20 05:55 |
2 |
3,537 |
by astrofunk Mon, 2014-04-21 06:47 |
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Non-standard amino acids by mark.wilson » Mon, 2010-08-02 12:13 |
0 |
1,788 |
by mark.wilson Mon, 2014-04-21 06:47 |
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analysis utilities for trajectories by cbala » Mon, 2010-06-14 02:58 |
0 |
1,721 |
by cbala Mon, 2014-04-21 06:47 |
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Backbone didn't change in docking, why? by SunH » Wed, 2010-06-02 10:07 |
6 |
6,049 |
by SunH Mon, 2014-04-21 06:47 |
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dump_pdb problems by srballard » Fri, 2010-05-28 14:04 |
0 |
2,088 |
by srballard Mon, 2014-04-21 06:47 |
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Help on Chimera Creator/Homodomain script by jadolfbr » Mon, 2010-06-14 21:34 |
1 |
3,088 |
by mark.wilson Mon, 2014-04-21 06:47 |
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Distance constraints for amino acids pairs by blubbi » Tue, 2010-05-18 05:39 |
0 |
1,779 |
by blubbi Mon, 2014-04-21 06:47 |
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Decoy Clustering by jadolfbr » Mon, 2010-02-01 22:50 |
5 |
5,690 |
by nawsad Mon, 2014-04-21 06:47 |
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segfault in loop by reve_etrange » Sat, 2010-02-13 21:49 |
1 |
2,131 |
by reve_etrange Mon, 2014-04-21 06:47 |
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Gunn fragment insertion by jadolfbr » Sun, 2010-02-28 09:39 |
0 |
1,661 |
by jadolfbr Mon, 2014-04-21 06:47 |
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How to tell where and what fragment or rotamer was inserted? by charlie.strauss » Wed, 2010-01-27 10:36 |
0 |
1,652 |
by charlie.strauss Mon, 2014-04-21 06:47 |
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[Solved]NameError by nunesjulioc » Fri, 2010-02-05 08:26 |
1 |
2,203 |
by AlexI Mon, 2014-04-21 06:47 |
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ImportError PyUnicodeUCS2 by nunesjulioc » Wed, 2010-02-17 07:29 |
0 |
2,853 |
by nunesjulioc Mon, 2014-04-21 06:47 |
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Python 2.6 by AndrewBworth » Mon, 2010-02-01 18:49 |
2 |
3,049 |
by AlexI Mon, 2014-04-21 06:47 |
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[Solved] Segmentation fault by zgcarvalho » Thu, 2010-02-11 06:30 |
2 |
4,663 |
by zgcarvalho Mon, 2014-04-21 06:47 |
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Architecture question by jwillis » Thu, 2010-02-25 09:43 |
0 |
1,775 |
by jwillis Mon, 2014-04-21 06:47 |
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[Solved] Docking in metalloprotease (Zinc problem) by zgcarvalho » Wed, 2010-01-20 16:04 |
3 |
4,975 |
by reve_etrange Mon, 2014-04-21 06:47 |
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Problems with building bindings. by AndrewBworth » Thu, 2010-02-04 17:26 |
0 |
1,831 |
by AndrewBworth Mon, 2014-04-21 06:47 |
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DockingSlideIntoContact does not work by batch2k » Wed, 2010-02-17 05:57 |
0 |
1,613 |
by batch2k Mon, 2014-04-21 06:47 |
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Updating Coords by jadolfbr » Sat, 2010-01-30 10:33 |
0 |
1,880 |
by jadolfbr Mon, 2014-04-21 06:47 |
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PyRosetta 1.1 for Windows? by sylvia » Tue, 2010-02-09 16:06 |
0 |
1,506 |
by sylvia Mon, 2014-04-21 06:47 |
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set constraints by zgcarvalho » Wed, 2010-02-24 09:42 |
3 |
3,450 |
by jadolfbr Mon, 2014-04-21 06:47 |
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[Solved] PyRosetta segmentation fault in Linux by AlexI » Wed, 2010-02-03 22:59 |
2 |
4,302 |
by AlexI Mon, 2014-04-21 06:47 |
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[Solved] Docking to a trimer by batch2k » Wed, 2010-02-17 02:18 |
1 |
2,145 |
by batch2k Mon, 2014-04-21 06:47 |
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Dose it support Fixed Backbone Ddg Prediction? by ppprotein » Fri, 2010-01-29 00:54 |
1 |
2,255 |
by sid Mon, 2014-04-21 06:47 |
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PyRosetta v1.1 by jadolfbr » Tue, 2010-02-09 08:02 |
0 |
1,539 |
by jadolfbr Mon, 2014-04-21 06:47 |
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building a 77 amino acid long fragment by tevang » Fri, 2010-02-19 06:37 |
0 |
1,647 |
by tevang Mon, 2014-04-21 06:47 |
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Falling at the first hurdle by pardave » Tue, 2010-01-05 00:53 |
1 |
2,342 |
by jadolfbr Mon, 2014-04-21 06:47 |
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how do I compile the python bindings for rosetta3 for python2.5 linux x86_64 by tru » Wed, 2009-11-25 11:38 |
1 |
2,228 |
by luki Mon, 2014-04-21 06:47 |
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Are there any plans to make PyRosetta directly functional on 64-bit architecture? by AndrewBworth » Fri, 2009-12-18 10:09 |
2 |
2,739 |
by sid Mon, 2014-04-21 06:47 |
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PyRosetta + PyMol by reve_etrange » Mon, 2009-11-23 16:44 |
3 |
4,462 |
by reve_etrange Mon, 2014-04-21 06:47 |
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Movemap Question by jadolfbr » Thu, 2010-01-07 11:02 |
1 |
2,254 |
by smlewis Mon, 2014-04-21 06:47 |
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Disuplhide bonds by batch2k » Tue, 2009-12-15 09:57 |
3 |
4,729 |
by jadolfbr Mon, 2014-04-21 06:47 |
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installing PyRosetta on Mac OSX 10.6 and Linux in VMWare by sid » Tue, 2009-10-06 09:04 |
2 |
4,057 |
by reve_etrange Mon, 2014-04-21 06:47 |
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Frequently Asked Questions by sid » Fri, 2009-10-02 09:00 |
0 |
2,178 |
by sid Mon, 2014-04-21 06:47 |
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Announcements by sid » Fri, 2009-10-02 08:54 |
0 |
1,619 |
by sid Mon, 2014-04-21 06:47 |
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installing PyRosetta on non-Intel-based Mac platform by sid » Tue, 2009-10-06 09:07 |
1 |
2,161 |
by JeffreyGray Mon, 2014-04-21 06:47 |
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Getting interface residues? by JuliusSu » Wed, 2014-04-16 21:58 |
2 |
2,903 |
by JuliusSu Thu, 2014-04-17 18:34 |
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Replace the rotamer of a particular residue in a pose by AyushGoyal » Wed, 2014-04-02 23:45 |
1 |
2,213 |
by rmoretti Thu, 2014-04-03 07:27 |
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Rotamer bin vector from chi angles of a residue in pose not found in Dunbrack rotamer library by AyushGoyal » Mon, 2014-02-24 22:18 |
3 |
4,932 |
by rmoretti Wed, 2014-02-26 09:40 |
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Using OStream objects in PyRosetta by ggyimesi » Mon, 2014-02-10 03:10 |
3 |
4,355 |
by ggyimesi Mon, 2014-02-17 09:52 |
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Beta-Hairpin Design by bharat_46010 » Wed, 2014-02-12 23:18 |
2 |
3,844 |
by bharat_46010 Thu, 2014-02-13 16:00 |
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