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Compilation

Error with DisjointSets while compiling Rosetta 3.8 using scons

Category: 
Compilation

We have been working with rosetta 2016.32 for a while, which compiles just fine. recently we decided to upgrade to the 3.8 release (2017.08). compiling with 'scons mode=release' reuslts in the following error trace:

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Rosetta_2016.32.58837-openmpi-1.10.2-gcc-6.1.0 compile errors

Category: 
Compilation

Hi, 

Im trying to cmpile Rosetta 3.7 with openmpi and getting the following errors. Please help.

Environmet: Centos 7.3 

Modules loaded : GCC/6.1.0, openmpi/1.10.2

mpicc --version
gcc (GCC) 6.1.0
######################################################################################################

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gcc error during MPI compilation, unrecognized option '-plugin'

Category: 
Compilation

Hello,

 

I am trying to complie the week46 built (rosetta_bin_linux_2016.46.59086_bundle) on a machine with 1) python/2.7.11    2) gcc/4.9.2        3) openmpi/1.10.1

I get the following error:

Post Situation: 

PocketGrid.cc file error during Rosetta compiling

Category: 
Compilation

Hi,

I am trying to compile Rosetta 3.7 (Released Sep 11, 2016) and it was building fine until it hit this error (attached below). It seems to be upset about the PocketGrid.cc file, but I'm not sure how to go about solving the error since I'm not familiar with coding languages. Any help would be greatly appreciated. Thank you.

Marlyn

 

Post Situation: 

week 46.2016 mpi comlie error: unrecognized command line option "-std=c++11"

Category: 
Compilation

Hi, 

I am trying to compile weekly build 46.2016 using "./scons.py bin -j3 mode=release extras=mpi"  and get this error:

error: unrecognized command line option "-std=c++11"

My gcc and g++ version is 4.8.2 20140120 (Red Hat 4.8.2-15). Any idea why this is happening? Any suggestion is highly appreciated.

 

Thanks!

Post Situation: 

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