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Rosetta 3 - General
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ligand flexibility by dave » Thu, 2015-02-12 08:48 |
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1,882 |
by rmoretti Wed, 2015-02-18 09:17 |
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The algorithm of adding missing Hydrogen to a backbone by ac.research » Tue, 2018-03-06 03:48 |
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1,882 |
by rmoretti Sat, 2018-03-17 10:43 |
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Structure refinement with RDC constraint by shushunur » Thu, 2018-01-18 00:44 |
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1,882 |
by rmoretti Tue, 2018-01-30 09:08 |
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which modules support MPI now? by albumns » Fri, 2013-11-08 01:32 |
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1,886 |
by rmoretti Mon, 2014-04-21 06:48 |
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Design with non-canonical amino acids (NCAA) by yinasun » Mon, 2019-08-05 00:34 |
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1,887 |
by matteoferla Thu, 2019-08-22 05:39 |
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Need help finding the best predicted structure after running ab initio by burkheadlab » Tue, 2011-06-21 11:18 |
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1,890 |
by burkheadlab Mon, 2014-04-21 06:47 |
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Parallel Installation of ROSETTA3.1 by anirbanzz » Mon, 2009-12-07 21:09 |
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1,893 |
by smlewis Mon, 2014-04-21 06:47 |
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Protein Docking Error by ac.research » Thu, 2017-08-17 02:57 |
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1,894 |
by ac.research Fri, 2017-08-18 00:53 |
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ERROR: Unable to open weights. by libai2098 » Thu, 2010-12-30 17:54 |
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1,894 |
by smlewis Mon, 2014-04-21 06:47 |
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Cluster decoys after running PlexPepDock by phanvy » Thu, 2014-06-19 06:03 |
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1,896 |
by nawsad Fri, 2014-06-20 02:48 |
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python problem? by albumns » Fri, 2012-03-02 11:03 |
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1,897 |
by albumns Mon, 2014-04-21 06:47 |
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Output fasta of enzdes generated pdbs by eyong123 » Tue, 2015-05-19 08:07 |
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1,898 |
by rmoretti Mon, 2015-05-25 11:07 |
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null rosetta energy/score by fred » Tue, 2011-10-18 10:31 |
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1,898 |
by fred Mon, 2014-04-21 06:47 |
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Problems in installing Rosetta3 in Red Hat Linux by jjz2009 » Mon, 2009-08-24 19:16 |
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1,898 |
by smlewis Mon, 2014-04-21 06:47 |
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segfault in membrane_abinitio2.mpi by siegert » Sat, 2014-06-14 15:56 |
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1,907 |
by yarovoy Wed, 2016-03-30 12:37 |
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is the RosettaNMR protocol available in Rosetta 3.x? by murgantia » Wed, 2011-01-26 00:39 |
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1,907 |
by smlewis Mon, 2014-04-21 06:47 |
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ab initio protein structure prediction by croshong » Wed, 2009-12-16 23:25 |
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1,908 |
by smlewis Mon, 2014-04-21 06:47 |
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Computing pairwise energies for rotamers by pachecoj » Sat, 2014-05-03 17:52 |
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1,908 |
by rmoretti Mon, 2014-05-12 07:50 |
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Calibur not listing cluster members by Swillard » Sun, 2018-07-01 13:07 |
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1,908 |
by benhardy Fri, 2021-05-07 07:22 |
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ERROR: Illegal value for real option -docking:dock_pert specified: 8 by libai2098 » Tue, 2011-03-15 02:26 |
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1,909 |
by smlewis Mon, 2014-04-21 06:47 |
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Memory leak? Memory consumption rises quickly when using JD2 app(s) by yuvals » Mon, 2014-10-06 11:35 |
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1,910 |
by yuvals Mon, 2014-10-06 15:02 |
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rosetta@home in local PC farm by jarod » Wed, 2010-05-05 18:31 |
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1,911 |
by smlewis Mon, 2014-04-21 06:47 |
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Is CST_Design required for enzdes protocol? by dasdevashishdas » Mon, 2018-09-03 00:51 |
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1,913 |
by dasdevashishdas Thu, 2018-09-27 03:35 |
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Rosetta Antibody: Unable to open file and terminates by denatured » Thu, 2019-12-12 11:26 |
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1,914 |
by denatured Fri, 2019-12-13 11:19 |
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Hydrogen bond detection and shape complementarity by sujigeorge1979 » Fri, 2019-06-14 02:39 |
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1,919 |
by sujigeorge1979 Thu, 2019-06-27 01:30 |
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How to design a stand-alone loop from a binding interface? by guangdianzi3 » Fri, 2011-02-11 21:11 |
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1,923 |
by smlewis Mon, 2014-04-21 06:47 |
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Does Rosetta 3.1 have the 9999 limitation? by wtscrystal » Sat, 2009-11-07 01:18 |
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1,925 |
by smlewis Mon, 2014-04-21 06:47 |
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tyrosine structure error by dave » Mon, 2012-04-30 04:38 |
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1,925 |
by frichter Mon, 2014-04-21 06:47 |
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Bug in LoopMover_Refine_Backrub.cc ? by SunH » Wed, 2010-12-15 00:08 |
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1,926 |
by smlewis Mon, 2014-04-21 06:47 |
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Reading chloride anions by Martin Floor » Mon, 2018-08-27 14:29 |
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1,928 |
by Martin Floor Tue, 2018-08-28 13:21 |
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de novo RNA loop by c.ocasion » Sun, 2021-02-14 18:34 |
5 |
1,931 |
by everyday847 Mon, 2021-03-29 20:19 |
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dock & design by sdh_h » Fri, 2016-09-02 03:07 |
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1,933 |
by rmoretti Mon, 2016-09-05 09:39 |
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Error with simple_cycpep_predict protocol while using a native pdb file by Florent Langenfeld » Tue, 2019-03-26 10:05 |
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1,934 |
by Florent Langenfeld Tue, 2020-09-22 03:03 |
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Can Rosetta generate proteins with sidechains ? by wszjzhang » Fri, 2010-01-08 08:26 |
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1,935 |
by smlewis Mon, 2014-04-21 06:47 |
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Running Backrub by enoee » Wed, 2010-10-27 07:51 |
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1,936 |
by smlewis Mon, 2014-04-21 06:47 |
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Ineffective Constraints by Sandy » Tue, 2017-09-05 19:36 |
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1,940 |
by CameronJA Wed, 2022-01-19 20:50 |
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question about protein docking results by albumns » Thu, 2010-11-25 08:19 |
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1,944 |
by smlewis Mon, 2014-04-21 06:47 |
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question about the exposed strand results in beta_strand_homodimer_design demo by szypanther » Wed, 2014-06-04 00:47 |
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1,944 |
by rmoretti Mon, 2014-06-09 10:05 |
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ERROR: FragmentIO: could not open file by ahmadkhalifa » Wed, 2018-01-31 13:30 |
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1,948 |
by rmoretti Wed, 2018-01-31 14:57 |
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Helix at loop site by berk » Fri, 2013-05-31 07:04 |
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1,951 |
by smlewis Mon, 2014-04-21 06:48 |
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make_fragments.pl without sparks by nannemdp » Mon, 2014-06-09 13:18 |
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1,953 |
by rmoretti Tue, 2014-06-10 11:34 |
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backrub and design by jtmacd » Thu, 2009-06-04 08:44 |
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1,954 |
by jtmacd Mon, 2014-04-21 06:47 |
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constraints by lah435 » Sun, 2017-03-12 03:25 |
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1,955 |
by lah435 Mon, 2017-04-03 19:50 |
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Free FSC score for validating refinement by ahmadkhalifa » Thu, 2018-05-10 05:53 |
2 |
1,955 |
by ahmadkhalifa Fri, 2018-06-29 07:54 |
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snugdock and rosetta 3.2?? by sudhar » Thu, 2011-02-24 00:36 |
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1,960 |
by smlewis Mon, 2014-04-21 06:47 |
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Non-ideal residue detected by cnelson » Thu, 2010-07-01 12:20 |
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1,961 |
by smlewis Mon, 2014-04-21 06:47 |
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Performance improvement in AbinitioRelax and relax 3.2 ??? by smg3d » Sun, 2011-02-06 08:59 |
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1,964 |
by smlewis Mon, 2014-04-21 06:47 |
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Symmetric Docking (Making Trimer from Monomerics Units) by sdg_lab » Thu, 2012-04-12 09:21 |
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1,965 |
by rmoretti Mon, 2014-04-21 06:47 |
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De novo density assembly weights don't add up to a 100 by ahmadkhalifa » Fri, 2018-08-03 12:07 |
3 |
1,965 |
by rmoretti Tue, 2019-10-22 07:05 |
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ab initio folding part of a protein by attesor » Wed, 2013-03-06 04:39 |
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1,967 |
by smlewis Mon, 2014-04-21 06:47 |
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Why I_sc of Rosetta 2016.02 and 2018.21 are so different? by eminegenetics » Mon, 2018-07-16 12:51 |
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1,967 |
by eminegenetics Wed, 2018-07-18 13:48 |
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How to make Rosetta's sampling more aggresive ? by jiongzhang » Mon, 2012-03-12 11:04 |
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1,968 |
by rmoretti Mon, 2014-04-21 06:47 |
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Data Check for a newb by ac.research » Sun, 2017-03-12 23:42 |
2 |
1,974 |
by ac.research Fri, 2017-03-31 07:36 |
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ssDNA (aptamer)/protein docking by JulienO » Fri, 2016-05-27 02:25 |
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1,979 |
by rmoretti Tue, 2016-07-12 08:47 |
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NMR / NOE related tools in 3.2 ? by smg3d » Sun, 2011-02-06 06:11 |
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1,982 |
by smlewis Mon, 2014-04-21 06:47 |
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Does comparative modeling works for membrane proteins by justin » Wed, 2012-03-21 04:58 |
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1,982 |
by smlewis Mon, 2014-04-21 06:47 |
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"abinitio" with mpi by al614 » Wed, 2016-10-12 12:17 |
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1,982 |
by rmoretti Fri, 2016-10-14 15:46 |
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rosetta nonlocal application by mintseris » Tue, 2013-12-31 13:13 |
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1,983 |
by rmoretti Mon, 2014-04-21 06:48 |
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C-term amidation by tttt » Tue, 2021-03-02 07:46 |
4 |
1,984 |
by tatsiana.bylund Mon, 2022-01-24 07:58 |
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dock_mcm not found by libai2098 » Mon, 2011-03-14 00:02 |
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1,985 |
by smlewis Mon, 2014-04-21 06:47 |
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Compilation in Mac OS 10.6 by rjn » Thu, 2010-02-18 12:35 |
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1,985 |
by smlewis Mon, 2014-04-21 06:47 |
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Parallel computing? by mansi » Thu, 2010-08-19 08:39 |
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2,003 |
by smlewis Mon, 2014-04-21 06:47 |
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ratio of conformers and docking output by pramod » Fri, 2014-12-12 12:54 |
1 |
2,005 |
by rmoretti Mon, 2014-12-15 02:37 |
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Bug in cluster? by nitroamos » Mon, 2011-11-21 12:53 |
1 |
2,008 |
by smlewis Mon, 2014-04-21 06:47 |
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How to minimize only a few key residues' orientation by Ronghai Cheng » Mon, 2018-11-05 18:37 |
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2,010 |
by Ronghai Cheng Tue, 2018-11-13 21:56 |
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RestrictToRepackingRLT and PreventRepackingRLT by coomteng@gmail.com » Mon, 2018-03-05 11:19 |
2 |
2,011 |
by coomteng@gmail.com Tue, 2018-03-06 02:31 |
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why not scoring function in loop model? by albumns » Thu, 2011-01-06 00:13 |
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2,013 |
by smlewis Mon, 2014-04-21 06:47 |
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Rosetta movie. by exchhattu » Mon, 2009-09-14 21:02 |
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2,014 |
by smlewis Mon, 2014-04-21 06:47 |
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Reproducing Robetta AB initio setup by jason-rosetta » Sat, 2014-10-04 04:26 |
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2,014 |
by jadolfbr Fri, 2014-10-31 08:55 |
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mcm for Docking in Rosetta3.1 by dyq » Tue, 2010-01-12 13:44 |
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2,015 |
by smlewis Mon, 2014-04-21 06:47 |
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Is it better to have smaller nstruct but many runs? by Loki01 » Mon, 2018-11-19 11:50 |
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2,017 |
by smlewis Mon, 2018-11-19 13:20 |
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How to use Rosetta Position constraint docking? by libai2098 » Mon, 2011-05-09 01:08 |
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2,019 |
by libai2098 Mon, 2014-04-21 06:47 |
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Rosetta groups in Scandinavia by knutjbj » Mon, 2010-11-15 23:50 |
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2,025 |
by smlewis Mon, 2014-04-21 06:47 |
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Ligand Docking with Orphan GPCR by marsaa » Thu, 2016-10-13 07:45 |
1 |
2,026 |
by rmoretti Fri, 2016-10-14 16:43 |
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Rosetta 3.1 seg faults gcc while compiling on Fedora 11 by jtmacd » Fri, 2009-10-02 05:26 |
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2,027 |
by smlewis Mon, 2014-04-21 06:47 |
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Binary silent Output file reading problem by wlzhang » Sun, 2014-04-20 17:47 |
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2,038 |
by wlzhang Sun, 2014-04-20 18:17 |
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Problem with run_lips.pl script by wdyrka » Tue, 2010-09-07 11:07 |
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2,046 |
by smlewis Mon, 2014-04-21 06:47 |
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nbr_atom in ligand docking by phanvy » Fri, 2015-07-03 07:40 |
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2,047 |
by rmoretti Fri, 2015-07-03 13:04 |
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total score by score » Mon, 2010-05-03 02:03 |
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2,051 |
by smlewis Mon, 2014-04-21 06:47 |
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ERROR - PDB's with occupancy field equal '1.0' by khanhbinh » Sun, 2012-09-23 09:38 |
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2,052 |
by rmoretti Mon, 2014-04-21 06:47 |
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Question about wrong homology design by mony2182 » Fri, 2014-07-04 10:26 |
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2,057 |
by rmoretti Mon, 2014-07-07 08:08 |
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Error in Running Symmetry Docking cutpoint. by Jacob » Wed, 2011-06-01 08:21 |
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2,061 |
by smlewis Mon, 2014-04-21 06:47 |
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Parametrisation problems by DmitriiN » Tue, 2016-05-31 09:37 |
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2,061 |
by DmitriiN Wed, 2016-06-01 15:46 |
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Ambiguous constraints are ignored in ab initio by mschneid » Wed, 2014-06-18 04:33 |
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2,066 |
by rmoretti Tue, 2014-07-01 12:21 |
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Knowledge check on steric effects by pachecoj » Thu, 2014-10-16 09:13 |
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2,070 |
by rmoretti Thu, 2014-10-16 10:33 |
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Generating Protein/NA decoys by rbeier1 » Mon, 2016-01-11 03:25 |
1 |
2,071 |
by rmoretti Thu, 2016-04-28 16:25 |
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header pathways not accessable: No such file or directory by rlwoltz » Tue, 2012-09-18 17:44 |
1 |
2,073 |
by smlewis Mon, 2014-04-21 06:47 |
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DockingProtocol mover ensemble error by dfcoelho » Tue, 2018-10-16 08:32 |
2 |
2,076 |
by brspurri Thu, 2020-08-20 13:22 |
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Abinitio isolated by ac.research » Wed, 2018-04-04 07:36 |
3 |
2,080 |
by smlewis Wed, 2018-04-04 10:42 |
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Derivative of the Energy function? by MkM » Fri, 2010-01-15 08:00 |
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2,081 |
by smlewis Mon, 2014-04-21 06:47 |
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How to create a rotamer set that includes all possible rotamers of all possible amino acids by AyushGoyal » Thu, 2014-11-06 10:37 |
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2,085 |
by smlewis Fri, 2014-11-07 12:03 |
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Error message: ArchiveManager spinning down by Lati » Sun, 2016-01-24 02:42 |
1 |
2,085 |
by smlewis Sun, 2016-01-24 03:24 |
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DesignByCavityProximity: element not expected by karenjgonzalez » Tue, 2020-01-28 05:16 |
4 |
2,093 |
by karenjgonzalez Tue, 2020-02-11 08:44 |
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Explanation of constraint functions? by aloshbau » Mon, 2015-12-14 22:38 |
2 |
2,094 |
by aloshbau Mon, 2015-12-14 23:30 |
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About RosettaScript examples by jiongzhang » Thu, 2012-03-08 10:50 |
1 |
2,099 |
by smlewis Mon, 2014-04-21 06:47 |
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Meaning of a couple terms? by aloshbau » Sun, 2016-02-07 16:48 |
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2,103 |
by aloshbau Sun, 2016-02-14 20:14 |
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I got the message "bad format in first line of silent file". How do I resolve this? by monos_morpheus » Thu, 2011-02-03 21:09 |
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2,104 |
by smlewis Mon, 2014-04-21 06:47 |
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reporting IteratedConvergence status by sdh_h » Thu, 2016-08-04 10:05 |
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2,106 |
by sdh_h Thu, 2016-08-04 11:22 |
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Entropy calculation by abdullah_ahmed » Wed, 2010-12-01 07:52 |
1 |
2,106 |
by smlewis Mon, 2014-04-21 06:47 |
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how to add constrains in flexible peptide docking by kingbo2008 » Fri, 2011-04-29 07:55 |
1 |
2,106 |
by smlewis Mon, 2014-04-21 06:47 |
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