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Rosetta 3 - General

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Normal topic Plexpepdock with Zn
by phanvy » Wed, 2014-06-25 06:10
1
2,192 by rmoretti
Tue, 2014-11-04 10:35
Normal topic Add hemes to cytochrome structures
by BuddySphinx » Sun, 2018-12-16 13:46
2
2,194 by rmoretti
Fri, 2019-03-29 14:43
Normal topic RASREC full_run vs. test_run
by Lati » Wed, 2015-10-28 03:26
1
2,195 by Lati
Fri, 2015-11-20 03:32
Normal topic I got so many atoms in one residue
by ylwang » Tue, 2020-03-24 04:40
3
2,195 by ylwang
Tue, 2020-03-24 19:35
Normal topic setup_run error with multiple resonance lists
by aep » Fri, 2016-03-18 13:36
1
2,196 by rmoretti
Thu, 2016-04-28 15:49
Normal topic Domain Insertion equivalent in Rosetta 3.2
by SenyorDrew » Wed, 2011-02-09 09:47
1
2,200 by smlewis
Mon, 2014-04-21 06:47
Normal topic Get nchi for heavy atoms
by pachecoj » Tue, 2014-11-04 19:04
1
2,202 by rmoretti
Tue, 2014-11-11 13:22
Normal topic Rotate chain
by Germanico » Sun, 2021-05-09 16:36
3
2,203 by danpf
Mon, 2021-05-10 10:04
Normal topic unit and scientific tests
by tricia » Sat, 2009-05-09 23:29
1
2,203 by smlewis
Mon, 2014-04-21 06:47
Normal topic Available of some protocals mentioned in publications
by SunH » Mon, 2013-09-09 20:47
1
2,205 by rmoretti
Mon, 2014-04-21 06:48
Normal topic Issues running the Matcher in 3.4 and 3.5
by Jhreed » Tue, 2015-05-26 11:38
1
2,206 by rmoretti
Wed, 2015-06-17 12:43
Normal topic fragment_picker error secondarysimilarity.cc line:132
by leanawen » Mon, 2013-04-15 14:33
1
2,208 by smlewis
Mon, 2014-04-21 06:47
Normal topic Modeling
by hwillis » Wed, 2009-08-12 11:07
1
2,210 by frichter
Mon, 2014-04-21 06:47
Normal topic Repeating sequence in Rosetta de novo protein folding
by orionshih » Wed, 2018-02-07 20:52
2
2,210 by sheehajh
Thu, 2018-02-08 21:18
Normal topic how to set the output name for fixbb design
by Lindsay » Mon, 2012-04-30 09:32
1
2,211 by smlewis
Mon, 2014-04-21 06:47
Normal topic idealization error
by albumns » Mon, 2011-02-07 01:28
1
2,211 by smlewis
Mon, 2014-04-21 06:47
Normal topic what kind of focefield does Rosetta based on?
by albumns » Tue, 2010-07-06 11:08
1
2,212 by smlewis
Mon, 2014-04-21 06:47
Normal topic PDB output sum
by enoee » Fri, 2010-07-16 12:29
1
2,215 by smlewis
Mon, 2014-04-21 06:47
Normal topic Atom_.cc line 304
by fred » Thu, 2014-09-11 12:04
1
2,217 by rmoretti
Fri, 2014-09-12 09:11
Normal topic Problems with parametrisation
by DmitriiN » Fri, 2016-05-27 04:51
1
2,222 by rmoretti
Tue, 2016-07-12 08:43
Normal topic null rosetta energy/score
by fred » Tue, 2011-10-18 10:31
1
2,224 by fred
Mon, 2014-04-21 06:47
Normal topic ERROR: Unable to open weights.
by libai2098 » Thu, 2010-12-30 17:54
1
2,231 by smlewis
Mon, 2014-04-21 06:47
Normal topic tyrosine structure error
by dave » Mon, 2012-04-30 04:38
1
2,234 by frichter
Mon, 2014-04-21 06:47
Normal topic demo documentation
by lshi » Fri, 2009-08-28 08:51
1
2,234 by smlewis
Mon, 2014-04-21 06:47
Normal topic python problem?
by albumns » Fri, 2012-03-02 11:03
1
2,239 by albumns
Mon, 2014-04-21 06:47
Normal topic Bug in LoopMover_Refine_Backrub.cc ?
by SunH » Wed, 2010-12-15 00:08
1
2,240 by smlewis
Mon, 2014-04-21 06:47
Normal topic Problems in installing Rosetta3 in Red Hat Linux
by jjz2009 » Mon, 2009-08-24 19:16
1
2,243 by smlewis
Mon, 2014-04-21 06:47
Normal topic how to do ensemble docking using rosetta3.1
by lqzhang » Mon, 2010-01-11 10:31
1
2,245 by sid
Mon, 2014-04-21 06:47
Normal topic is the RosettaNMR protocol available in Rosetta 3.x?
by murgantia » Wed, 2011-01-26 00:39
1
2,248 by smlewis
Mon, 2014-04-21 06:47
Normal topic opt-E Reference energies
by vijayan » Wed, 2013-08-07 07:35
1
2,249 by rmoretti
Mon, 2014-04-21 06:48
Normal topic ref2015: approx. kcal/mol or actually kJ/mol?
by matteoferla » Thu, 2021-10-07 04:04
2
2,253 by matteoferla
Thu, 2021-10-07 09:31
Normal topic which modules support MPI now?
by albumns » Fri, 2013-11-08 01:32
1
2,255 by rmoretti
Mon, 2014-04-21 06:48
Normal topic Cluster decoys after running PlexPepDock
by phanvy » Thu, 2014-06-19 06:03
1
2,256 by nawsad
Fri, 2014-06-20 02:48
Normal topic How to design a stand-alone loop from a binding interface?
by guangdianzi3 » Fri, 2011-02-11 21:11
1
2,256 by smlewis
Mon, 2014-04-21 06:47
Normal topic local refinement
by mahajanr » Mon, 2010-07-19 15:04
1
2,263 by smlewis
Mon, 2014-04-21 06:47
Normal topic optimisation of a protein-protein interface
by sdh_h » Thu, 2017-05-04 05:06
1
2,266 by rmoretti
Mon, 2017-05-15 09:03
Normal topic MakeRotLib
by yinasun » Fri, 2019-07-26 02:18
2
2,266 by jalan
Sun, 2020-04-12 08:01
Normal topic Parallel Installation of ROSETTA3.1
by anirbanzz » Mon, 2009-12-07 21:09
1
2,268 by smlewis
Mon, 2014-04-21 06:47
Normal topic ERROR: Illegal value for real option -docking:dock_pert specified: 8
by libai2098 » Tue, 2011-03-15 02:26
1
2,269 by smlewis
Mon, 2014-04-21 06:47
Normal topic Computing pairwise energies for rotamers
by pachecoj » Sat, 2014-05-03 17:52
1
2,271 by rmoretti
Mon, 2014-05-12 07:50
Normal topic Memory leak? Memory consumption rises quickly when using JD2 app(s)
by yuvals » Mon, 2014-10-06 11:35
1
2,271 by yuvals
Mon, 2014-10-06 15:02
Normal topic pmut and scoring
by ldlamini » Tue, 2021-09-14 00:46
3
2,272 by matteoferla
Mon, 2021-09-20 06:05
Normal topic rosetta@home in local PC farm
by jarod » Wed, 2010-05-05 18:31
1
2,273 by smlewis
Mon, 2014-04-21 06:47
Normal topic ligand flexibility
by dave » Thu, 2015-02-12 08:48
1
2,274 by rmoretti
Wed, 2015-02-18 09:17
Normal topic question about protein docking results
by albumns » Thu, 2010-11-25 08:19
1
2,276 by smlewis
Mon, 2014-04-21 06:47
Normal topic Running RosettaScripts, but got an error "src/utility/options/OptionCollection.cc, line 1153, No values of the appropriate type"
by zhoubin » Sun, 2021-02-28 08:51
3
2,277 by zhoubin
Mon, 2021-03-01 22:11
Normal topic How to convert fragments to PDB format?
by JadAbbass » Wed, 2015-08-19 04:05
1
2,277 by rmoretti
Wed, 2015-09-02 12:48
Normal topic segfault in membrane_abinitio2.mpi
by siegert » Sat, 2014-06-14 15:56
1
2,278 by yarovoy
Wed, 2016-03-30 12:37
Normal topic Problem with undetected lower and upper terminus variants for new polymer
by Martin Floor » Sat, 2022-06-11 06:51
5
2,279 by matteoferla
Fri, 2022-07-01 13:49
Normal topic AbInitioRelax.mpi Hangs - Waiting for Job Request
by nleroy » Thu, 2019-10-31 07:30
2
2,280 by nleroy
Fri, 2019-11-08 12:44
Normal topic Does comparative modeling works for membrane proteins
by justin » Wed, 2012-03-21 04:58
1
2,282 by smlewis
Mon, 2014-04-21 06:47
Normal topic How did you begin to learn Rosetta?
by mdeklotz » Mon, 2018-07-30 10:08
1
2,282 by jkleman
Tue, 2018-07-31 13:19
Normal topic dock_mcm not found
by libai2098 » Mon, 2011-03-14 00:02
1
2,282 by smlewis
Mon, 2014-04-21 06:47
Normal topic Does Rosetta 3.1 have the 9999 limitation?
by wtscrystal » Sat, 2009-11-07 01:18
1
2,295 by smlewis
Mon, 2014-04-21 06:47
Normal topic Symmetric Docking (Making Trimer from Monomerics Units)
by sdg_lab » Thu, 2012-04-12 09:21
1
2,297 by rmoretti
Mon, 2014-04-21 06:47
Normal topic How to make Rosetta's sampling more aggresive ?
by jiongzhang » Mon, 2012-03-12 11:04
1
2,297 by rmoretti
Mon, 2014-04-21 06:47
Normal topic Rosetta matching error
by purvi24 » Mon, 2018-03-12 02:38
1
2,298 by smlewis
Mon, 2018-03-12 09:57
Normal topic ab initio protein structure prediction
by croshong » Wed, 2009-12-16 23:25
1
2,302 by smlewis
Mon, 2014-04-21 06:47
Normal topic Structure refinement with RDC constraint
by shushunur » Thu, 2018-01-18 00:44
1
2,304 by rmoretti
Tue, 2018-01-30 09:08
Normal topic Running Backrub
by enoee » Wed, 2010-10-27 07:51
1
2,304 by smlewis
Mon, 2014-04-21 06:47
Normal topic Can Rosetta generate proteins with sidechains ?
by wszjzhang » Fri, 2010-01-08 08:26
1
2,306 by smlewis
Mon, 2014-04-21 06:47
Normal topic make_fragments.pl without sparks
by nannemdp » Mon, 2014-06-09 13:18
1
2,308 by rmoretti
Tue, 2014-06-10 11:34
Normal topic Compilation in Mac OS 10.6
by rjn » Thu, 2010-02-18 12:35
1
2,310 by smlewis
Mon, 2014-04-21 06:47
Normal topic Non-ideal residue detected
by cnelson » Thu, 2010-07-01 12:20
1
2,311 by smlewis
Mon, 2014-04-21 06:47
Normal topic Performance improvement in AbinitioRelax and relax 3.2 ???
by smg3d » Sun, 2011-02-06 08:59
1
2,318 by smlewis
Mon, 2014-04-21 06:47
Normal topic backrub and design
by jtmacd » Thu, 2009-06-04 08:44
1
2,318 by jtmacd
Mon, 2014-04-21 06:47
Normal topic Error running GenericMonteCarlo mover within MultipleOutputWrapper mover
by abhi_pe_acharya » Mon, 2018-04-16 04:58
1
2,322 by abhi_pe_acharya
Thu, 2018-04-19 03:49
Normal topic snugdock and rosetta 3.2??
by sudhar » Thu, 2011-02-24 00:36
1
2,324 by smlewis
Mon, 2014-04-21 06:47
Normal topic question about the exposed strand results in beta_strand_homodimer_design demo
by szypanther » Wed, 2014-06-04 00:47
1
2,329 by rmoretti
Mon, 2014-06-09 10:05
Normal topic Helix at loop site
by berk » Fri, 2013-05-31 07:04
1
2,334 by smlewis
Mon, 2014-04-21 06:48
Normal topic ab initio folding part of a protein
by attesor » Wed, 2013-03-06 04:39
1
2,335 by smlewis
Mon, 2014-04-21 06:47
Normal topic why not scoring function in loop model?
by albumns » Thu, 2011-01-06 00:13
1
2,336 by smlewis
Mon, 2014-04-21 06:47
Normal topic "Illegal Instruction" for particular Movers/Filters
by Jhreed » Thu, 2016-08-11 12:59
1
2,336 by smlewis
Thu, 2016-08-11 13:16
Normal topic How to use Rosetta Position constraint docking?
by libai2098 » Mon, 2011-05-09 01:08
1
2,344 by libai2098
Mon, 2014-04-21 06:47
Normal topic NMR / NOE related tools in 3.2 ?
by smg3d » Sun, 2011-02-06 06:11
1
2,344 by smlewis
Mon, 2014-04-21 06:47
Normal topic Parallel computing?
by mansi » Thu, 2010-08-19 08:39
1
2,346 by smlewis
Mon, 2014-04-21 06:47
Normal topic mcm for Docking in Rosetta3.1
by dyq » Tue, 2010-01-12 13:44
1
2,347 by smlewis
Mon, 2014-04-21 06:47
Normal topic H3 modelling scoring function
by aneamtu » Wed, 2017-12-27 23:10
2
2,350 by aneamtu
Mon, 2018-01-08 23:49
Normal topic rosetta compile
by MA » Wed, 2017-04-26 00:46
2
2,351 by MA
Thu, 2017-04-27 18:53
Normal topic Output fasta of enzdes generated pdbs
by eyong123 » Tue, 2015-05-19 08:07
1
2,351 by rmoretti
Mon, 2015-05-25 11:07
Normal topic Rosetta groups in Scandinavia
by knutjbj » Mon, 2010-11-15 23:50
1
2,352 by smlewis
Mon, 2014-04-21 06:47
Normal topic Fitting a structure with an unrecognized residue to an EM density
by ahmadkhalifa » Tue, 2017-12-05 14:44
2
2,353 by ahmadkhalifa
Wed, 2017-12-06 12:30
Normal topic Bug in cluster?
by nitroamos » Mon, 2011-11-21 12:53
1
2,363 by smlewis
Mon, 2014-04-21 06:47
Normal topic "abinitio" with mpi
by al614 » Wed, 2016-10-12 12:17
1
2,363 by rmoretti
Fri, 2016-10-14 15:46
Normal topic rosetta nonlocal application
by mintseris » Tue, 2013-12-31 13:13
1
2,364 by rmoretti
Mon, 2014-04-21 06:48
Normal topic dock & design
by sdh_h » Fri, 2016-09-02 03:07
1
2,365 by rmoretti
Mon, 2016-09-05 09:39
Normal topic Problem with run_lips.pl script
by wdyrka » Tue, 2010-09-07 11:07
1
2,370 by smlewis
Mon, 2014-04-21 06:47
Normal topic Do Rosetta support hydroxide(OH-) and oxide(O2-) params?
by dasdevashishdas » Thu, 2018-08-16 21:15
2
2,372 by dasdevashishdas
Thu, 2018-08-23 18:02
Normal topic Rosetta Resfile header
by G Mustafa » Mon, 2020-01-20 06:45
2
2,376 by G Mustafa
Tue, 2020-01-21 06:04
Normal topic ERROR - PDB's with occupancy field equal '1.0'
by khanhbinh » Sun, 2012-09-23 09:38
1
2,377 by rmoretti
Mon, 2014-04-21 06:47
Normal topic Does Rosetta have a class diagram for each class in the source code?
by ylwang » Thu, 2019-11-21 04:24
3
2,390 by ylwang
Sat, 2019-11-23 06:26
Normal topic Error in Running Symmetry Docking cutpoint.
by Jacob » Wed, 2011-06-01 08:21
1
2,397 by smlewis
Mon, 2014-04-21 06:47
Normal topic Rosetta-foldtree and docking
by tingting » Tue, 2022-03-15 22:49
5
2,397 by aastha.pal
Mon, 2022-06-27 09:55
Normal topic ratio of conformers and docking output
by pramod » Fri, 2014-12-12 12:54
1
2,398 by rmoretti
Mon, 2014-12-15 02:37
Normal topic total score
by score » Mon, 2010-05-03 02:03
1
2,399 by smlewis
Mon, 2014-04-21 06:47
Normal topic Protein Docking Error
by ac.research » Thu, 2017-08-17 02:57
2
2,401 by ac.research
Fri, 2017-08-18 00:53
Normal topic The algorithm of adding missing Hydrogen to a backbone
by ac.research » Tue, 2018-03-06 03:48
1
2,403 by rmoretti
Sat, 2018-03-17 10:43
Normal topic Reproducing Robetta AB initio setup
by jason-rosetta » Sat, 2014-10-04 04:26
1
2,407 by jadolfbr
Fri, 2014-10-31 08:55
Normal topic ERROR: FragmentIO: could not open file
by ahmadkhalifa » Wed, 2018-01-31 13:30
1
2,408 by rmoretti
Wed, 2018-01-31 14:57
Normal topic Derivative of the Energy function?
by MkM » Fri, 2010-01-15 08:00
1
2,410 by smlewis
Mon, 2014-04-21 06:47
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