# Compilation

## Error when install RosettaCommon using Scons

Category:
Compilation

I'm building release executables for RosettaCommons, I input to the terminal with the following code:

scons bin mode=release


And I got the following error:

Post Situation:

## Compilation and unit test failures

Category:
Compilation

Hi all,

I installed Rosetta 3.13 in KISTI supercomputor 5 (Nurion) (https://www.ksc.re.kr/eng/index/main).

And, I ran the unit tests. It is showing 85% success rate.

Below is what I did and I have attached the relevant documents.

$cd rosetta/main/source$ module purge

$module load craype-network-opa python/2.7.15 gcc/8.3.0 mvapich2/2.3.1 craype-mic-knl Post Situation: ## Compiling rosetta to include rosetta_scripts_jd3 Category: Compilation Hi, I've currently installed rosetta3 on aws cloud vm under ubuntu OS (Ubuntu 20.04.2 LTS). I try to use a protocol from Khersonsky et al. 2018 (PMID: 30270109). In order to do so, a rosetta_scripts_jd3.default.linuxgccrelease file is needed. However, I did not find such file under$ROSETTA/main/source/bin/

My rosetta version is: rosetta_src_2021.16.61629_bundle
I've compiled it with: ./scons.py -j8 mode=release bin

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## tarball not correct for 3.13

Category:
Compilation

Hi,

I just downloaded the 3.13 tarball (precompiled binaries) and when I extracted it, the directory structure says it's rosetta_bin_linux_2021.16.61629_bundle (the previous version).  Additionally, the md5sum values for all of the tarballs also point to 2021.16.61629.  Can you upload the 3.13 version?

Best,

Ken

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## Cereal

Category:
Compilation

Is there any disadavantage in this build one should be wary of? Like slower, segfault-y-er, lacking other features etc.
The fact that it is not one of the options makes me think there may be, hence my asking.

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## Problems to install rosetta rosetta_bin_linux_2021.07.61567_bundle

Category:
Compilation

Hi, can some body help me.

I got this message, after use the command:  ./scons.py -j22 bin mode=release extras=mpi

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## Trouble installing Rosetta 3.9 on MacOS Catalina

Category:
Compilation

Hello, I am having trouble installing Rosetta 3.9 on my dual core Intel mac running MacOS Catalina. I am following the instructions from this website: https://new.rosettacommons.org/docs/latest/build_documentation/Build-Documentation

However, I am getting errors. May someone help me troubleshoot through this process? I have attached a text file with the commands I used and the errors I am getting.

Johnny

Post Situation:

## The /main/source/bin directory is not created

Category:
Compilation

Hello,

I am trying to compile rosetta_src_2021.16.61629_bundle.tgz and for this I follow the following steps:

• tar -xvzf rosetta_src_2021.16.61629_bundle.tgz
• cd rosetta_src_2021.16.61629_bundle / main / source /
• ./scons.py -j6 bin mode = release> salida.txt

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## error in installing rosetta in ubuntu64

Category:
Compilation

Hi, sorry for disturbing you but  I have problems installing Rosetta

regards

hr

tar -xvzf rosetta_src_2021.16.61629_bundle.tgz

ubuntu@ubuntu:~/software1\$  python -V

Python 2.7.18

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## opencl support programs

Category:
Compilation

Hi, All:

We just compiled opencl version of rosetta. But when I run rosetta_scripts.opencl.linuxgccrelease, there is no running processes found in GPU. I am just wondering if GPU is supported after opencl version is successfully compiled. Thanks.

Best,

Post Situation: