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how to do ensemble docking using rosetta3.1 by lqzhang » Mon, 2010-01-11 10:31 |
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2,205 |
by sid Mon, 2014-04-21 06:47 |
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How to input pdb to rosetta format add "missing" residues to pdb file by zhisheng » Tue, 2011-06-07 09:51 |
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3,955 |
by smlewis Mon, 2014-04-21 06:47 |
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Problems with parametrisation by DmitriiN » Fri, 2016-05-27 04:51 |
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2,169 |
by rmoretti Tue, 2016-07-12 08:43 |
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Unable to create col_complex.pdb file by sayan500 » Tue, 2019-07-30 22:08 |
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1,451 |
by rmoretti Mon, 2019-08-26 14:52 |
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the question about ddg of disulfide bond mutants by asbelx » Sun, 2021-08-29 06:40 |
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1,162 |
by asbelx Wed, 2021-09-08 23:19 |
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How to create a rotamer set that includes all possible rotamers of all possible amino acids by AyushGoyal » Thu, 2014-11-06 10:37 |
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2,475 |
by smlewis Fri, 2014-11-07 12:03 |
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Protein Interface Design using PSSM by ccruz » Sun, 2020-05-24 14:27 |
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2,005 |
by nannemdp Tue, 2020-05-26 06:33 |
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Question about wrong homology design by mony2182 » Fri, 2014-07-04 10:26 |
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2,400 |
by rmoretti Mon, 2014-07-07 08:08 |
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Negative fa_rep on ddG ? by LiorZ » Thu, 2016-09-08 07:44 |
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1,868 |
by rmoretti Thu, 2016-09-08 07:56 |
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fastdesign with constraints in RosettaScripts by staciekim » Wed, 2017-11-29 13:33 |
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1,898 |
by rmoretti Sat, 2017-12-02 10:22 |
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MotifGraft error: "Residue connection id changed when creating a new residue at seqpos" by dfcoelho » Mon, 2020-02-03 11:09 |
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1,592 |
by dfcoelho Tue, 2020-02-04 07:45 |
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There is a problem executing “rosetta_scripts.static.linuxgccrelease ” by zjya » Tue, 2021-02-02 23:44 |
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1,690 |
by rmoretti Wed, 2021-02-03 14:45 |
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Error when trying to use xml script to design PDB by Wexter300 » Fri, 2023-02-24 13:29 |
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657 |
by rmoretti Fri, 2023-02-24 13:58 |
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Error in RMSD calculation when native sequence deviates by abdullah » Tue, 2009-11-10 08:56 |
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2,718 |
by smlewis Mon, 2014-04-21 06:47 |
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How to run docking in rosetta with small molecule by ajaniharesh » Tue, 2012-02-28 03:58 |
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3,965 |
by smlewis Mon, 2014-04-21 06:47 |
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what kind of focefield does Rosetta based on? by albumns » Tue, 2010-07-06 11:08 |
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2,175 |
by smlewis Mon, 2014-04-21 06:47 |
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Binary silent Output file reading problem by wlzhang » Sun, 2014-04-20 17:47 |
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2,424 |
by wlzhang Sun, 2014-04-20 18:17 |
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pKa prediction using the Rosetta scoring function by das » Tue, 2016-06-21 06:42 |
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1,955 |
by ssrb Tue, 2016-07-12 10:02 |
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Score function: unable to open input_files/1qys.pdb by Cyrrusm » Tue, 2020-10-13 11:35 |
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1,433 |
by rmoretti Tue, 2020-10-13 11:40 |
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Problems in installing Rosetta3 in Red Hat Linux by jjz2009 » Mon, 2009-08-24 19:16 |
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2,203 |
by smlewis Mon, 2014-04-21 06:47 |
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start pose and native pose don't match in lengh by zhisheng » Thu, 2011-12-15 10:23 |
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2,446 |
by smlewis Mon, 2014-04-21 06:47 |
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problems in building rosetta3.1 (solved) by zpliu09 » Wed, 2010-03-31 02:03 |
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2,037 |
by smlewis Mon, 2014-04-21 06:47 |
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run:test_cycles by ramin » Sun, 2013-03-10 11:05 |
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2,148 |
by smlewis Mon, 2014-04-21 06:47 |
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How to get the RMSD between two .pdb structures? by cossio » Wed, 2014-12-03 05:33 |
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3,528 |
by rmoretti Wed, 2014-12-03 18:52 |
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Rosetta matching error by purvi24 » Mon, 2018-03-12 02:38 |
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2,238 |
by smlewis Mon, 2018-03-12 09:57 |
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Rosetta params for taxol by ahmadkhalifa » Sat, 2019-03-30 22:37 |
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1,532 |
by rmoretti Wed, 2019-04-03 10:03 |
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error when using script best_ifaceE.py by windmill » Thu, 2020-06-18 21:30 |
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1,274 |
by windmill Thu, 2020-06-18 21:32 |
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Symmetric docking - tetramer of trimers by SenyorDrew » Fri, 2011-04-29 08:26 |
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2,951 |
by IAndre Mon, 2014-04-21 06:47 |
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3D Structure Prediction by anirbanzz » Sat, 2010-04-17 02:47 |
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2,730 |
by smlewis Mon, 2014-04-21 06:47 |
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Multiprocessing and running jobs on server using slurm by ahmadkhalifa » Mon, 2018-04-09 10:59 |
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4,182 |
by rmoretti Tue, 2018-04-10 16:00 |
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[Question] How do the <FILTERS> confidence work? by jrom » Wed, 2024-01-24 10:25 |
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243 |
by rmoretti Wed, 2024-01-24 11:55 |
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Rosetta membrane blastpgp/psiblast database problem for lips4 generation by fbarrera » Tue, 2014-09-16 11:45 |
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3,047 |
by rmoretti Wed, 2014-09-17 10:06 |
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Ligand Docking with Orphan GPCR by marsaa » Thu, 2016-10-13 07:45 |
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2,397 |
by rmoretti Fri, 2016-10-14 16:43 |
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Error in enzyme_design.default.linuxgccrelease: corrupted size vs. prev_size by dasdevashishdas » Fri, 2018-10-12 00:55 |
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1,712 |
by jyy Mon, 2020-01-13 17:19 |
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Domain Insertion equivalent in Rosetta 3.2 by SenyorDrew » Wed, 2011-02-09 09:47 |
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2,160 |
by smlewis Mon, 2014-04-21 06:47 |
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About RosettaScript examples by jiongzhang » Thu, 2012-03-08 10:50 |
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2,438 |
by smlewis Mon, 2014-04-21 06:47 |
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PDB output sum by enoee » Fri, 2010-07-16 12:29 |
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2,175 |
by smlewis Mon, 2014-04-21 06:47 |
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question about the exposed strand results in beta_strand_homodimer_design demo by szypanther » Wed, 2014-06-04 00:47 |
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2,288 |
by rmoretti Mon, 2014-06-09 10:05 |
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RosettaProtein_Docking by khadkab@mcmaster.ca » Tue, 2015-06-30 11:28 |
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3,219 |
by rmoretti Fri, 2015-07-03 13:24 |
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Rosetta 3.1 seg faults gcc while compiling on Fedora 11 by jtmacd » Fri, 2009-10-02 05:26 |
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2,396 |
by smlewis Mon, 2014-04-21 06:47 |
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How to define a theozyme from the .pdb crystal structure without ligand? by weifulei » Mon, 2019-05-20 21:18 |
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1,899 |
by rmoretti Tue, 2019-07-09 12:31 |
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Gaussian Constraint For Dihedrals by jinli711 » Thu, 2020-07-23 10:47 |
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1,412 |
by matteoferla Fri, 2020-07-24 03:06 |
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How to relax a protein model calling Rosetta functions from my C++ code by sncrivelli » Tue, 2011-10-25 00:16 |
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3,094 |
by smlewis Mon, 2014-04-21 06:47 |
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how to set the output name for fixbb design by Lindsay » Mon, 2012-04-30 09:32 |
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2,180 |
by smlewis Mon, 2014-04-21 06:47 |
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[dev] quickest way to determine bond distance between polymeric-bonded residues in Pose/Conformation by ipetrik_ambry » Thu, 2018-01-18 12:26 |
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1,744 |
by rmoretti Tue, 2018-01-30 08:29 |
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extract pdbs segmentation fault by Swillard » Fri, 2017-09-08 07:20 |
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1,821 |
by rmoretti Fri, 2017-09-08 15:15 |
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Parallel Installation of ROSETTA3.1 by anirbanzz » Mon, 2009-12-07 21:09 |
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2,226 |
by smlewis Mon, 2014-04-21 06:47 |
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"unrecognized aa ACT" by einew » Sat, 2011-08-27 14:58 |
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2,556 |
by smlewis Mon, 2014-04-21 06:47 |
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enzyme design implementation by rohi » Wed, 2020-12-16 09:54 |
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1,387 |
by rmoretti Tue, 2021-02-09 11:30 |
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Changing Monte Carlo temperature for relax by jruhym » Thu, 2012-02-02 15:18 |
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2,563 |
by rmoretti Mon, 2014-04-21 06:47 |
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How to import SymmDock models into Rosetta for local docking and energy minimization by devroop » Fri, 2012-07-20 13:20 |
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3,254 |
by smlewis Mon, 2014-04-21 06:47 |
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How to modify disulfide bonds constrain in homology modeling by eunwook » Mon, 2013-05-13 04:56 |
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2,888 |
by smlewis Mon, 2014-04-21 06:47 |
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score function for centroid mode by MarkW » Thu, 2015-02-26 08:56 |
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2,451 |
by jadolfbr Fri, 2015-02-27 11:08 |
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energy units by jtmacd » Mon, 2009-07-06 10:39 |
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3,774 |
by smlewis Mon, 2014-04-21 06:47 |
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Generating Protein/NA decoys by rbeier1 » Mon, 2016-01-11 03:25 |
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2,539 |
by rmoretti Thu, 2016-04-28 16:25 |
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Icouldnot find DDMI protocol for design protein by ladimafakher » Mon, 2018-02-12 09:22 |
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1,736 |
by rmoretti Mon, 2018-02-12 09:39 |
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Setting output values using a database (with relax app) by pedro.guillem » Thu, 2020-05-14 04:33 |
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1,409 |
by pedro.guillem Wed, 2020-06-24 04:41 |
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MPI nodes hanging and output log incomplete by yuvals » Wed, 2014-06-18 05:40 |
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5,603 |
by yuvals Sat, 2014-06-21 02:17 |
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meaning of the clustering the output files by phanvy » Tue, 2014-06-24 07:11 |
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2,039 |
by rmoretti Tue, 2014-07-01 12:07 |
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Remodel introduces clashes when stitching by achambe » Thu, 2016-08-25 17:51 |
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1,837 |
by possu Tue, 2016-08-30 16:57 |
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MET, MSE, and fMET Amino Acids by ac.research » Sat, 2017-11-18 06:33 |
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3,464 |
by smlewis Sun, 2017-11-19 20:08 |
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computing Pnear for Rosetta ligand docking by rohi » Mon, 2021-02-01 08:27 |
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1,622 |
by rmoretti Tue, 2021-02-09 09:37 |
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docking using rosetta3.1 and rosetta2.3 leads to very different results by lqzhang » Thu, 2010-01-14 11:54 |
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2,158 |
by sid Mon, 2014-04-21 06:47 |
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how same random seeds can be used in rosetta for mpi run. by exchhattu » Wed, 2009-10-28 22:09 |
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2,816 |
by smlewis Mon, 2014-04-21 06:47 |
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Generating Fragment Libraries for Metal Binding Proteins by buzb » Wed, 2011-01-26 12:43 |
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2,868 |
by kaue Mon, 2014-04-21 06:47 |
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How to set the enviroment variable $ROSETTA3, $ $ROSETTA3_DB, $ROSETTA_TOOLS? by Sunyp_IM » Thu, 2017-07-27 01:07 |
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4,507 |
by SenyorDrew Sat, 2017-07-29 09:59 |
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Rosetta Enzyme design cst block raises error by cryosky » Thu, 2021-09-16 08:47 |
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1,256 |
by cryosky Fri, 2021-09-17 22:04 |
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could restta consider the flexibility of backbone duirng protein docking? by albumns » Wed, 2010-11-24 01:00 |
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2,497 |
by smlewis Mon, 2014-04-21 06:47 |
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The algorithm of adding missing Hydrogen to a backbone by ac.research » Tue, 2018-03-06 03:48 |
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2,343 |
by rmoretti Sat, 2018-03-17 10:43 |
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Will Rosetta Flexpepdock be adequate for this for now.? by monos_morpheus » Wed, 2011-04-27 19:10 |
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2,561 |
by londonir Mon, 2014-04-21 06:47 |
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problems with cluster program by umeshghosh » Thu, 2010-04-08 07:45 |
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2,514 |
by smlewis Mon, 2014-04-21 06:47 |
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Comparative modelling of dimer by rt1108 » Fri, 2012-06-15 07:31 |
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2,792 |
by smlewis Mon, 2014-04-21 06:47 |
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hbnet by mintseris » Mon, 2018-03-19 09:02 |
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1,679 |
by rmoretti Mon, 2018-03-19 09:08 |
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intrensic disrodered proteins by ac.research » Thu, 2019-04-04 07:20 |
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1,588 |
by vmulligan Mon, 2019-04-08 14:49 |
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have trouble with "relax" models by wszjzhang » Thu, 2010-01-28 10:02 |
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2,154 |
by smlewis Mon, 2014-04-21 06:47 |
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RASREC full_run vs. test_run by Lati » Wed, 2015-10-28 03:26 |
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2,158 |
by Lati Fri, 2015-11-20 03:32 |
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Error: Start tag expected, '<' not found by Isomerase » Wed, 2022-04-06 19:45 |
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1,851 |
by rmoretti Thu, 2022-04-07 07:51 |
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Method for adding residues into PDB's w/ RosettaScripts. by Wexter300 » Wed, 2023-03-15 13:07 |
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630 |
by rmoretti Thu, 2023-03-16 11:46 |
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Performance improvement in AbinitioRelax and relax 3.2 ??? by smg3d » Sun, 2011-02-06 08:59 |
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2,290 |
by smlewis Mon, 2014-04-21 06:47 |
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python problem? by albumns » Fri, 2012-03-02 11:03 |
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2,205 |
by albumns Mon, 2014-04-21 06:47 |
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ddg energy components by japgar » Tue, 2010-07-13 13:20 |
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32,984 |
by smlewis Mon, 2014-04-21 06:47 |
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Issues running the Matcher in 3.4 and 3.5 by Jhreed » Tue, 2015-05-26 11:38 |
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2,171 |
by rmoretti Wed, 2015-06-17 12:43 |
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How to read the output score file from rosetta? by Sunyp_IM » Sun, 2017-08-27 05:29 |
1 |
3,026 |
by rmoretti Mon, 2017-08-28 09:32 |
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Questions regarding fragmentation using Robetta by ahmadkhalifa » Thu, 2018-06-28 13:24 |
1 |
1,611 |
by smlewis Thu, 2018-06-28 13:34 |
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about the option -constraints:cst_fa_file & -constraints:cst_fa_weight by jiongzhang » Sat, 2010-12-25 12:55 |
1 |
3,376 |
by smlewis Mon, 2014-04-21 06:47 |
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How to use Rosetta Position constraint docking? by libai2098 » Mon, 2011-05-09 01:08 |
1 |
2,315 |
by libai2098 Mon, 2014-04-21 06:47 |
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ddG average energy by dave » Wed, 2013-04-03 03:36 |
1 |
2,515 |
by rmoretti Mon, 2014-04-21 06:47 |
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Can rosetta model cyclic peptide? by Apiwat » Fri, 2014-02-07 02:08 |
1 |
2,637 |
by rmoretti Tue, 2014-02-11 06:24 |
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Error running GenericMonteCarlo mover within MultipleOutputWrapper mover by abhi_pe_acharya » Mon, 2018-04-16 04:58 |
1 |
2,262 |
by abhi_pe_acharya Thu, 2018-04-19 03:49 |
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How to determine the value size in block of *.cst files? by weifulei » Sun, 2019-05-05 19:56 |
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1,450 |
by rmoretti Tue, 2019-07-09 15:59 |
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Multiple Relax runnings by mb0261 » Sat, 2022-08-27 05:42 |
1 |
751 |
by rmoretti Tue, 2022-09-06 08:22 |
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Global Docking with output analysis RMS by kwu030 » Fri, 2024-02-23 09:17 |
1 |
248 |
by rmoretti Mon, 2024-02-26 08:24 |
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Installing on windows using MinGW by abdullah_ahmed » Wed, 2010-09-15 08:45 |
1 |
2,023 |
by smlewis Mon, 2014-04-21 06:47 |
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Re: Basic python scripts for File Manipulation by bharat_46010 » Mon, 2011-03-14 19:44 |
1 |
3,362 |
by smlewis Mon, 2014-04-21 06:47 |
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Compilation in Mac OS 10.6 by rjn » Thu, 2010-02-18 12:35 |
1 |
2,275 |
by smlewis Mon, 2014-04-21 06:47 |
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Partial homology modeling in Rosetta by al614 » Mon, 2016-10-31 12:30 |
1 |
2,108 |
by rmoretti Mon, 2016-11-14 15:12 |
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use_truncated_termini not working in combination with params files by georg » Thu, 2020-03-26 13:14 |
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1,378 |
by matteoferla Tue, 2020-04-14 03:36 |
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AbinitioRelax of RCSB PDB structures by ac.research » Tue, 2019-09-03 02:35 |
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1,621 |
by danpf Tue, 2019-09-03 10:39 |
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connecting pdb files by Hyun » Wed, 2021-11-17 22:32 |
1 |
952 |
by ajasja Thu, 2021-11-18 00:33 |
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the problem in making fragments by croshong » Thu, 2009-12-03 17:15 |
1 |
2,581 |
by smlewis Mon, 2014-04-21 06:47 |
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